Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim4P70271 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
Pdlim4P70271 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim4P70271 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim4P70271 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim4P70271 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim4P70271 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim4P70271 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim4P70271 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.64■□□□□ 0.25
Pdlim4P70271 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim4P70271 Gm9847-201ENSMUST00000052528 599 ntBASIC16.64■□□□□ 0.25
Pdlim4P70271 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim4P70271 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim4P70271 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim4P70271 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim4P70271 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim4P70271 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pdlim4P70271 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim4P70271 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim4P70271 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim4P70271 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim4P70271 Gm12922-201ENSMUST00000120626 809 ntBASIC16.63■□□□□ 0.25
Pdlim4P70271 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.63■□□□□ 0.25
Pdlim4P70271 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim4P70271 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim4P70271 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim4P70271 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pdlim4P70271 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pdlim4P70271 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim4P70271 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim4P70271 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim4P70271 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim4P70271 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim4P70271 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pdlim4P70271 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.62■□□□□ 0.25
Pdlim4P70271 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim4P70271 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Pdlim4P70271 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim4P70271 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.62■□□□□ 0.25
Pdlim4P70271 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.62■□□□□ 0.25
Pdlim4P70271 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim4P70271 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim4P70271 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim4P70271 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim4P70271 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim4P70271 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.61■□□□□ 0.25
Pdlim4P70271 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim4P70271 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pdlim4P70271 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pdlim4P70271 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pdlim4P70271 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.61■□□□□ 0.25
Pdlim4P70271 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.61■□□□□ 0.25
Pdlim4P70271 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.61■□□□□ 0.25
Pdlim4P70271 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim4P70271 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.61■□□□□ 0.25
Pdlim4P70271 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim4P70271 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.6■□□□□ 0.25
Pdlim4P70271 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim4P70271 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim4P70271 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim4P70271 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim4P70271 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.6■□□□□ 0.25
Pdlim4P70271 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Pdlim4P70271 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.6■□□□□ 0.25
Pdlim4P70271 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim4P70271 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.6■□□□□ 0.25
Pdlim4P70271 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim4P70271 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim4P70271 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim4P70271 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim4P70271 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim4P70271 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim4P70271 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim4P70271 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim4P70271 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim4P70271 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim4P70271 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim4P70271 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim4P70271 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim4P70271 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.59■□□□□ 0.25
Pdlim4P70271 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim4P70271 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Pdlim4P70271 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim4P70271 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim4P70271 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pdlim4P70271 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pdlim4P70271 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim4P70271 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.58■□□□□ 0.24
Pdlim4P70271 Golgb1-201ENSMUST00000023534 498 ntBASIC16.58■□□□□ 0.24
Pdlim4P70271 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim4P70271 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim4P70271 Gm13241-201ENSMUST00000094493 780 ntBASIC16.58■□□□□ 0.24
Pdlim4P70271 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim4P70271 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim4P70271 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim4P70271 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.58■□□□□ 0.24
Pdlim4P70271 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim4P70271 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pdlim4P70271 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim4P70271 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms