Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pdx1P52946 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pdx1P52946 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.92■□□□□ 0.78
Pdx1P52946 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.92■□□□□ 0.78
Pdx1P52946 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pdx1P52946 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pdx1P52946 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Pdx1P52946 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdx1P52946 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdx1P52946 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pdx1P52946 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdx1P52946 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Pdx1P52946 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdx1P52946 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdx1P52946 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdx1P52946 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdx1P52946 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Pdx1P52946 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.9■□□□□ 0.78
Pdx1P52946 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.9■□□□□ 0.78
Pdx1P52946 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.9■□□□□ 0.78
Pdx1P52946 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pdx1P52946 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pdx1P52946 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.9■□□□□ 0.78
Pdx1P52946 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pdx1P52946 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pdx1P52946 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pdx1P52946 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pdx1P52946 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Pdx1P52946 Gm21956-201ENSMUST00000179946 522 ntBASIC19.89■□□□□ 0.77
Pdx1P52946 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pdx1P52946 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pdx1P52946 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Pdx1P52946 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pdx1P52946 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pdx1P52946 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdx1P52946 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pdx1P52946 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pdx1P52946 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Pdx1P52946 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdx1P52946 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdx1P52946 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.88■□□□□ 0.77
Pdx1P52946 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdx1P52946 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdx1P52946 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.88■□□□□ 0.77
Pdx1P52946 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdx1P52946 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Pdx1P52946 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pdx1P52946 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pdx1P52946 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdx1P52946 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdx1P52946 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.87■□□□□ 0.77
Pdx1P52946 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pdx1P52946 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdx1P52946 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdx1P52946 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdx1P52946 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdx1P52946 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdx1P52946 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdx1P52946 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdx1P52946 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.86■□□□□ 0.77
Pdx1P52946 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.86■□□□□ 0.77
Pdx1P52946 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pdx1P52946 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pdx1P52946 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdx1P52946 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pdx1P52946 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdx1P52946 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdx1P52946 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.85■□□□□ 0.77
Pdx1P52946 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pdx1P52946 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Pdx1P52946 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.84■□□□□ 0.77
Pdx1P52946 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdx1P52946 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pdx1P52946 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.84■□□□□ 0.77
Pdx1P52946 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pdx1P52946 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdx1P52946 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdx1P52946 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdx1P52946 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdx1P52946 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pdx1P52946 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdx1P52946 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Pdx1P52946 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pdx1P52946 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pdx1P52946 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pdx1P52946 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pdx1P52946 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pdx1P52946 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pdx1P52946 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pdx1P52946 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Pdx1P52946 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.83■□□□□ 0.77
Pdx1P52946 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pdx1P52946 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pdx1P52946 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.83■□□□□ 0.77
Pdx1P52946 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.83■□□□□ 0.77
Pdx1P52946 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.83■□□□□ 0.77
Pdx1P52946 Gm13241-201ENSMUST00000094493 780 ntBASIC19.83■□□□□ 0.77
Pdx1P52946 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pdx1P52946 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pdx1P52946 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms