Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Chd1P40201 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Chd1P40201 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Chd1P40201 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Chd1P40201 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Chd1P40201 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Chd1P40201 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Chd1P40201 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Chd1P40201 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Chd1P40201 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Chd1P40201 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Chd1P40201 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
Chd1P40201 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC31.46■■■□□ 2.63
Chd1P40201 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Chd1P40201 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC31.45■■■□□ 2.63
Chd1P40201 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.62
Chd1P40201 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Chd1P40201 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC31.44■■■□□ 2.62
Chd1P40201 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Chd1P40201 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Chd1P40201 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Chd1P40201 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC31.44■■■□□ 2.62
Chd1P40201 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Chd1P40201 AC115037.1-201ENSMUST00000223391 2173 ntBASIC31.43■■■□□ 2.62
Chd1P40201 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Chd1P40201 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Chd1P40201 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
Chd1P40201 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC31.42■■■□□ 2.62
Chd1P40201 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Chd1P40201 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC31.41■■■□□ 2.62
Chd1P40201 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC31.41■■■□□ 2.62
Chd1P40201 Gm10812-201ENSMUST00000099864 546 ntBASIC31.41■■■□□ 2.62
Chd1P40201 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Chd1P40201 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
Chd1P40201 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC31.41■■■□□ 2.62
Chd1P40201 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC31.41■■■□□ 2.62
Chd1P40201 Gm5408-201ENSMUST00000197998 747 ntBASIC31.41■■■□□ 2.62
Chd1P40201 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Chd1P40201 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
Chd1P40201 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Chd1P40201 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Chd1P40201 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Chd1P40201 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC31.4■■■□□ 2.62
Chd1P40201 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Chd1P40201 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Chd1P40201 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC31.4■■■□□ 2.62
Chd1P40201 Gm20049-201ENSMUST00000219950 730 ntBASIC31.4■■■□□ 2.62
Chd1P40201 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Chd1P40201 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Chd1P40201 AC130671.1-201ENSMUST00000227384 1237 ntBASIC31.39■■■□□ 2.62
Chd1P40201 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Chd1P40201 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Chd1P40201 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Chd1P40201 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Chd1P40201 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Chd1P40201 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
Chd1P40201 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Chd1P40201 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC31.38■■■□□ 2.61
Chd1P40201 Gm37856-201ENSMUST00000191634 999 ntBASIC31.38■■■□□ 2.61
Chd1P40201 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC31.38■■■□□ 2.61
Chd1P40201 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Chd1P40201 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Chd1P40201 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Chd1P40201 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Chd1P40201 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Chd1P40201 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
Chd1P40201 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC31.36■■■□□ 2.61
Chd1P40201 AC135637.1-201ENSMUST00000227750 365 ntBASIC31.35■■■□□ 2.61
Chd1P40201 AC122769.4-201ENSMUST00000228166 901 ntBASIC31.35■■■□□ 2.61
Chd1P40201 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Chd1P40201 Gm26524-201ENSMUST00000192339 390 ntBASIC31.35■■■□□ 2.61
Chd1P40201 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Chd1P40201 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Chd1P40201 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
Chd1P40201 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Chd1P40201 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Chd1P40201 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Chd1P40201 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Chd1P40201 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Chd1P40201 Gm6211-202ENSMUST00000167849 925 ntBASIC31.32■■■□□ 2.61
Chd1P40201 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC31.32■■■□□ 2.61
Chd1P40201 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.61
Chd1P40201 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Chd1P40201 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Chd1P40201 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
Chd1P40201 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
Chd1P40201 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Chd1P40201 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Chd1P40201 AC153890.1-201ENSMUST00000220021 2469 ntBASIC31.31■■■□□ 2.6
Chd1P40201 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC31.31■■■□□ 2.6
Chd1P40201 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Chd1P40201 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Chd1P40201 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC31.31■■■□□ 2.6
Chd1P40201 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Chd1P40201 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Chd1P40201 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
Chd1P40201 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC31.29■■■□□ 2.6
Chd1P40201 Gm13181-201ENSMUST00000120117 1069 ntBASIC31.29■■■□□ 2.6
Chd1P40201 Gm3807-201ENSMUST00000193520 1168 ntBASIC31.29■■■□□ 2.6
Chd1P40201 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC31.29■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms