Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a11P31650 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a11P31650 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a11P31650 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a11P31650 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a11P31650 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a11P31650 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a11P31650 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Slc6a11P31650 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.06■□□□□ 0.64
Slc6a11P31650 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a11P31650 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a11P31650 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.06■□□□□ 0.64
Slc6a11P31650 Gm9847-201ENSMUST00000052528 599 ntBASIC19.06■□□□□ 0.64
Slc6a11P31650 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a11P31650 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a11P31650 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a11P31650 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a11P31650 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a11P31650 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a11P31650 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Slc6a11P31650 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Slc6a11P31650 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Slc6a11P31650 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a11P31650 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a11P31650 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a11P31650 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a11P31650 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a11P31650 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a11P31650 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.04■□□□□ 0.64
Slc6a11P31650 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Slc6a11P31650 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Slc6a11P31650 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Slc6a11P31650 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Slc6a11P31650 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a11P31650 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a11P31650 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a11P31650 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a11P31650 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a11P31650 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a11P31650 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a11P31650 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a11P31650 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.02■□□□□ 0.64
Slc6a11P31650 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a11P31650 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a11P31650 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a11P31650 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a11P31650 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
Slc6a11P31650 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.02■□□□□ 0.64
Slc6a11P31650 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.02■□□□□ 0.64
Slc6a11P31650 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.02■□□□□ 0.64
Slc6a11P31650 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.02■□□□□ 0.64
Slc6a11P31650 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a11P31650 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.02■□□□□ 0.64
Slc6a11P31650 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a11P31650 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slc6a11P31650 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slc6a11P31650 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Slc6a11P31650 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slc6a11P31650 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slc6a11P31650 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Slc6a11P31650 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a11P31650 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a11P31650 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Slc6a11P31650 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a11P31650 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a11P31650 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a11P31650 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a11P31650 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a11P31650 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a11P31650 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a11P31650 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.01■□□□□ 0.63
Slc6a11P31650 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Slc6a11P31650 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a11P31650 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a11P31650 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a11P31650 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a11P31650 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.01■□□□□ 0.63
Slc6a11P31650 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a11P31650 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a11P31650 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slc6a11P31650 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19■□□□□ 0.63
Slc6a11P31650 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slc6a11P31650 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slc6a11P31650 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19■□□□□ 0.63
Slc6a11P31650 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a11P31650 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a11P31650 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19■□□□□ 0.63
Slc6a11P31650 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19■□□□□ 0.63
Slc6a11P31650 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a11P31650 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slc6a11P31650 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a11P31650 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a11P31650 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a11P31650 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a11P31650 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.99■□□□□ 0.63
Slc6a11P31650 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a11P31650 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a11P31650 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a11P31650 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a11P31650 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms