Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.7■□□□□ 0.42
Cd28P31041 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cd28P31041 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.7■□□□□ 0.42
Cd28P31041 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd28P31041 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd28P31041 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd28P31041 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd28P31041 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cd28P31041 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cd28P31041 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.69■□□□□ 0.42
Cd28P31041 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd28P31041 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd28P31041 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd28P31041 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd28P31041 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cd28P31041 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cd28P31041 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.68■□□□□ 0.42
Cd28P31041 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd28P31041 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd28P31041 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cd28P31041 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd28P31041 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cd28P31041 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd28P31041 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cd28P31041 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd28P31041 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cd28P31041 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cd28P31041 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd28P31041 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cd28P31041 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cd28P31041 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd28P31041 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd28P31041 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd28P31041 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cd28P31041 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd28P31041 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Cd28P31041 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd28P31041 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd28P31041 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.67■□□□□ 0.42
Cd28P31041 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd28P31041 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cd28P31041 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd28P31041 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd28P31041 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd28P31041 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cd28P31041 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cd28P31041 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd28P31041 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd28P31041 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.66■□□□□ 0.42
Cd28P31041 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Cd28P31041 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cd28P31041 Gm14523-201ENSMUST00000117260 558 ntBASIC17.66■□□□□ 0.42
Cd28P31041 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.66■□□□□ 0.42
Cd28P31041 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.66■□□□□ 0.42
Cd28P31041 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Cd28P31041 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd28P31041 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd28P31041 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cd28P31041 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cd28P31041 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd28P31041 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cd28P31041 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd28P31041 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.65■□□□□ 0.42
Cd28P31041 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd28P31041 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd28P31041 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd28P31041 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Cd28P31041 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.65■□□□□ 0.42
Cd28P31041 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd28P31041 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cd28P31041 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Cd28P31041 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cd28P31041 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cd28P31041 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.64■□□□□ 0.41
Cd28P31041 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cd28P31041 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.64■□□□□ 0.41
Cd28P31041 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd28P31041 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd28P31041 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd28P31041 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cd28P31041 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd28P31041 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.63■□□□□ 0.41
Cd28P31041 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd28P31041 Gm7332-201ENSMUST00000118351 454 ntBASIC17.63■□□□□ 0.41
Cd28P31041 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd28P31041 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.63■□□□□ 0.41
Cd28P31041 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Cd28P31041 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cd28P31041 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Cd28P31041 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cd28P31041 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd28P31041 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd28P31041 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.62■□□□□ 0.41
Cd28P31041 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cd28P31041 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.62■□□□□ 0.41
Cd28P31041 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cd28P31041 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd28P31041 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd28P31041 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd28P31041 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms