Protein–RNA interactions for Protein: P30204

Msr1, Macrophage scavenger receptor types I and II, mousemouse

Known RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msr1P30204 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Msr1P30204 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.33■□□□□ 0.68
Msr1P30204 Gm12366-201ENSMUST00000121722 873 ntBASIC19.33■□□□□ 0.68
Msr1P30204 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.33■□□□□ 0.68
Msr1P30204 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.33■□□□□ 0.68
Msr1P30204 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.33■□□□□ 0.68
Msr1P30204 Gm5786-201ENSMUST00000085368 882 ntBASIC19.33■□□□□ 0.68
Msr1P30204 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msr1P30204 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msr1P30204 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Msr1P30204 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.33■□□□□ 0.68
Msr1P30204 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.33■□□□□ 0.68
Msr1P30204 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.33■□□□□ 0.68
Msr1P30204 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msr1P30204 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msr1P30204 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msr1P30204 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msr1P30204 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msr1P30204 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msr1P30204 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Msr1P30204 Gm10420-201ENSMUST00000121713 882 ntBASIC19.32■□□□□ 0.68
Msr1P30204 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Msr1P30204 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Msr1P30204 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msr1P30204 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.32■□□□□ 0.68
Msr1P30204 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.32■□□□□ 0.68
Msr1P30204 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msr1P30204 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msr1P30204 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msr1P30204 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msr1P30204 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Msr1P30204 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Msr1P30204 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.31■□□□□ 0.68
Msr1P30204 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Msr1P30204 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msr1P30204 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msr1P30204 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msr1P30204 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msr1P30204 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Msr1P30204 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msr1P30204 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msr1P30204 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msr1P30204 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msr1P30204 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msr1P30204 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msr1P30204 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msr1P30204 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Msr1P30204 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.3■□□□□ 0.68
Msr1P30204 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msr1P30204 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Msr1P30204 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msr1P30204 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msr1P30204 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Msr1P30204 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Msr1P30204 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msr1P30204 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msr1P30204 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msr1P30204 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Msr1P30204 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msr1P30204 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msr1P30204 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Msr1P30204 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msr1P30204 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msr1P30204 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msr1P30204 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msr1P30204 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msr1P30204 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.29■□□□□ 0.68
Msr1P30204 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Msr1P30204 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.29■□□□□ 0.68
Msr1P30204 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msr1P30204 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Msr1P30204 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Msr1P30204 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Msr1P30204 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Msr1P30204 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msr1P30204 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msr1P30204 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msr1P30204 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msr1P30204 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msr1P30204 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Msr1P30204 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Msr1P30204 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msr1P30204 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Msr1P30204 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.27■□□□□ 0.68
Msr1P30204 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Msr1P30204 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Msr1P30204 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Msr1P30204 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Msr1P30204 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.26■□□□□ 0.67
Msr1P30204 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msr1P30204 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
Msr1P30204 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msr1P30204 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.26■□□□□ 0.67
Msr1P30204 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msr1P30204 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msr1P30204 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Msr1P30204 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.25■□□□□ 0.67
Msr1P30204 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.25■□□□□ 0.67
Msr1P30204 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Msr1P30204 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms