Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cd40P27512 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cd40P27512 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd40P27512 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd40P27512 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cd40P27512 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cd40P27512 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd40P27512 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cd40P27512 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd40P27512 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cd40P27512 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd40P27512 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd40P27512 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd40P27512 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd40P27512 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd40P27512 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cd40P27512 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd40P27512 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd40P27512 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cd40P27512 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.25■□□□□ 0.51
Cd40P27512 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd40P27512 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd40P27512 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Cd40P27512 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd40P27512 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cd40P27512 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cd40P27512 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cd40P27512 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cd40P27512 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Cd40P27512 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.23■□□□□ 0.51
Cd40P27512 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd40P27512 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cd40P27512 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cd40P27512 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd40P27512 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cd40P27512 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cd40P27512 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cd40P27512 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cd40P27512 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cd40P27512 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.22■□□□□ 0.51
Cd40P27512 Gm13241-201ENSMUST00000094493 780 ntBASIC18.22■□□□□ 0.51
Cd40P27512 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cd40P27512 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cd40P27512 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cd40P27512 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Cd40P27512 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cd40P27512 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cd40P27512 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cd40P27512 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cd40P27512 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cd40P27512 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cd40P27512 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cd40P27512 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.2■□□□□ 0.5
Cd40P27512 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cd40P27512 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cd40P27512 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.2■□□□□ 0.5
Cd40P27512 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.2■□□□□ 0.5
Cd40P27512 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.2■□□□□ 0.5
Cd40P27512 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cd40P27512 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cd40P27512 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.2■□□□□ 0.5
Cd40P27512 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cd40P27512 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cd40P27512 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd40P27512 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd40P27512 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cd40P27512 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.19■□□□□ 0.5
Cd40P27512 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd40P27512 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd40P27512 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd40P27512 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd40P27512 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cd40P27512 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.18■□□□□ 0.5
Cd40P27512 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd40P27512 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.18■□□□□ 0.5
Cd40P27512 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd40P27512 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cd40P27512 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cd40P27512 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd40P27512 Gm15039-201ENSMUST00000118914 875 ntBASIC18.17■□□□□ 0.5
Cd40P27512 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cd40P27512 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd40P27512 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd40P27512 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd40P27512 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd40P27512 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cd40P27512 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cd40P27512 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.16■□□□□ 0.5
Cd40P27512 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cd40P27512 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cd40P27512 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd40P27512 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.15■□□□□ 0.5
Cd40P27512 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.15■□□□□ 0.5
Cd40P27512 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
Cd40P27512 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd40P27512 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd40P27512 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd40P27512 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd40P27512 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd40P27512 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms