Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hdac3O88895 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hdac3O88895 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hdac3O88895 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hdac3O88895 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hdac3O88895 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hdac3O88895 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hdac3O88895 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac3O88895 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac3O88895 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac3O88895 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac3O88895 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac3O88895 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac3O88895 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac3O88895 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.87■□□□□ 0.45
Hdac3O88895 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac3O88895 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac3O88895 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac3O88895 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac3O88895 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac3O88895 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Hdac3O88895 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac3O88895 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac3O88895 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hdac3O88895 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac3O88895 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.86■□□□□ 0.45
Hdac3O88895 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac3O88895 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac3O88895 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac3O88895 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac3O88895 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.85■□□□□ 0.45
Hdac3O88895 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac3O88895 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Hdac3O88895 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac3O88895 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac3O88895 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac3O88895 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac3O88895 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Hdac3O88895 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac3O88895 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac3O88895 Gm7417-201ENSMUST00000192950 473 ntBASIC17.84■□□□□ 0.45
Hdac3O88895 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.84■□□□□ 0.45
Hdac3O88895 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac3O88895 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.84■□□□□ 0.45
Hdac3O88895 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac3O88895 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac3O88895 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac3O88895 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac3O88895 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hdac3O88895 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
Hdac3O88895 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hdac3O88895 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hdac3O88895 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.83■□□□□ 0.45
Hdac3O88895 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hdac3O88895 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac3O88895 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac3O88895 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.83■□□□□ 0.44
Hdac3O88895 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac3O88895 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac3O88895 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac3O88895 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Hdac3O88895 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac3O88895 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac3O88895 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac3O88895 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Hdac3O88895 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac3O88895 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac3O88895 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac3O88895 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac3O88895 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac3O88895 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac3O88895 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac3O88895 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac3O88895 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.81■□□□□ 0.44
Hdac3O88895 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.81■□□□□ 0.44
Hdac3O88895 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac3O88895 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac3O88895 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.81■□□□□ 0.44
Hdac3O88895 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.81■□□□□ 0.44
Hdac3O88895 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac3O88895 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac3O88895 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac3O88895 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.8■□□□□ 0.44
Hdac3O88895 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Hdac3O88895 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.8■□□□□ 0.44
Hdac3O88895 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac3O88895 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac3O88895 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Hdac3O88895 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac3O88895 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.8■□□□□ 0.44
Hdac3O88895 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Hdac3O88895 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac3O88895 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac3O88895 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac3O88895 Etf1-202ENSMUST00000180351 108 ntBASIC17.79■□□□□ 0.44
Hdac3O88895 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.79■□□□□ 0.44
Hdac3O88895 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.79■□□□□ 0.44
Hdac3O88895 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac3O88895 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac3O88895 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms