Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Best1O88870 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.49■□□□□ 0.71
Best1O88870 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Best1O88870 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Best1O88870 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Best1O88870 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Best1O88870 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Best1O88870 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Best1O88870 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.48■□□□□ 0.71
Best1O88870 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Best1O88870 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Best1O88870 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
Best1O88870 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
Best1O88870 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Best1O88870 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Best1O88870 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Best1O88870 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.46■□□□□ 0.71
Best1O88870 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Best1O88870 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Best1O88870 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Best1O88870 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
Best1O88870 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.46■□□□□ 0.71
Best1O88870 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Best1O88870 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Best1O88870 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Best1O88870 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Best1O88870 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Best1O88870 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Best1O88870 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Best1O88870 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Best1O88870 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Best1O88870 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.44■□□□□ 0.7
Best1O88870 Gm26833-201ENSMUST00000180899 440 ntBASIC19.44■□□□□ 0.7
Best1O88870 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Best1O88870 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Best1O88870 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Best1O88870 Smad6-203ENSMUST00000179458 273 ntBASIC19.43■□□□□ 0.7
Best1O88870 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
Best1O88870 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Best1O88870 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Best1O88870 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Best1O88870 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Best1O88870 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Best1O88870 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Best1O88870 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Best1O88870 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Best1O88870 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Best1O88870 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.42■□□□□ 0.7
Best1O88870 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Best1O88870 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Best1O88870 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Best1O88870 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Best1O88870 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Best1O88870 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Best1O88870 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Best1O88870 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Best1O88870 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Best1O88870 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Best1O88870 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Best1O88870 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Best1O88870 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Best1O88870 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.41■□□□□ 0.7
Best1O88870 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Best1O88870 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.41■□□□□ 0.7
Best1O88870 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.41■□□□□ 0.7
Best1O88870 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Best1O88870 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Best1O88870 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Best1O88870 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Best1O88870 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Best1O88870 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Best1O88870 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Best1O88870 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Best1O88870 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Best1O88870 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Best1O88870 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Best1O88870 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Best1O88870 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Best1O88870 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Best1O88870 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Best1O88870 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Best1O88870 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Best1O88870 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Best1O88870 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Best1O88870 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.39■□□□□ 0.69
Best1O88870 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Best1O88870 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Best1O88870 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Best1O88870 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Best1O88870 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.38■□□□□ 0.69
Best1O88870 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Best1O88870 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Best1O88870 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Best1O88870 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Best1O88870 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Best1O88870 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Best1O88870 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Best1O88870 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Best1O88870 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Best1O88870 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms