Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim1O70400 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim1O70400 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.88■□□□□ 0.77
Pdlim1O70400 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim1O70400 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.88■□□□□ 0.77
Pdlim1O70400 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.88■□□□□ 0.77
Pdlim1O70400 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim1O70400 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim1O70400 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Pdlim1O70400 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Pdlim1O70400 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim1O70400 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim1O70400 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim1O70400 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim1O70400 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim1O70400 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim1O70400 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim1O70400 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Pdlim1O70400 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim1O70400 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Pdlim1O70400 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.87■□□□□ 0.77
Pdlim1O70400 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim1O70400 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim1O70400 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim1O70400 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim1O70400 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim1O70400 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim1O70400 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim1O70400 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.86■□□□□ 0.77
Pdlim1O70400 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim1O70400 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim1O70400 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.86■□□□□ 0.77
Pdlim1O70400 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.86■□□□□ 0.77
Pdlim1O70400 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Pdlim1O70400 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.86■□□□□ 0.77
Pdlim1O70400 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim1O70400 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pdlim1O70400 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pdlim1O70400 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim1O70400 Gm12821-201ENSMUST00000120022 600 ntBASIC19.85■□□□□ 0.77
Pdlim1O70400 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Pdlim1O70400 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
Pdlim1O70400 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim1O70400 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Pdlim1O70400 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
Pdlim1O70400 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim1O70400 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.85■□□□□ 0.77
Pdlim1O70400 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Pdlim1O70400 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim1O70400 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim1O70400 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.85■□□□□ 0.77
Pdlim1O70400 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim1O70400 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim1O70400 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim1O70400 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pdlim1O70400 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pdlim1O70400 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim1O70400 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.84■□□□□ 0.77
Pdlim1O70400 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pdlim1O70400 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim1O70400 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim1O70400 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Pdlim1O70400 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pdlim1O70400 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Pdlim1O70400 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Pdlim1O70400 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Pdlim1O70400 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Pdlim1O70400 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pdlim1O70400 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pdlim1O70400 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Pdlim1O70400 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim1O70400 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim1O70400 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Pdlim1O70400 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim1O70400 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim1O70400 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim1O70400 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim1O70400 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim1O70400 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim1O70400 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim1O70400 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim1O70400 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.81■□□□□ 0.76
Pdlim1O70400 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.81■□□□□ 0.76
Pdlim1O70400 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim1O70400 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim1O70400 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.81■□□□□ 0.76
Pdlim1O70400 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim1O70400 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.81■□□□□ 0.76
Pdlim1O70400 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Pdlim1O70400 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pdlim1O70400 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim1O70400 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim1O70400 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim1O70400 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim1O70400 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pdlim1O70400 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim1O70400 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim1O70400 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
Pdlim1O70400 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim1O70400 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms