Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2b3O09039 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2b3O09039 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
Sh2b3O09039 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2b3O09039 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2b3O09039 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2b3O09039 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2b3O09039 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2b3O09039 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2b3O09039 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2b3O09039 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2b3O09039 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.84■□□□□ 0.45
Sh2b3O09039 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2b3O09039 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2b3O09039 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Sh2b3O09039 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.83■□□□□ 0.44
Sh2b3O09039 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.83■□□□□ 0.44
Sh2b3O09039 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh2b3O09039 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2b3O09039 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sh2b3O09039 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2b3O09039 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2b3O09039 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2b3O09039 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2b3O09039 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Sh2b3O09039 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Sh2b3O09039 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2b3O09039 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sh2b3O09039 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh2b3O09039 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh2b3O09039 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Sh2b3O09039 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.81■□□□□ 0.44
Sh2b3O09039 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh2b3O09039 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh2b3O09039 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.81■□□□□ 0.44
Sh2b3O09039 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2b3O09039 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.8■□□□□ 0.44
Sh2b3O09039 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sh2b3O09039 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2b3O09039 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.8■□□□□ 0.44
Sh2b3O09039 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2b3O09039 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Sh2b3O09039 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.8■□□□□ 0.44
Sh2b3O09039 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2b3O09039 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.8■□□□□ 0.44
Sh2b3O09039 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2b3O09039 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2b3O09039 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Sh2b3O09039 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2b3O09039 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2b3O09039 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.8■□□□□ 0.44
Sh2b3O09039 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2b3O09039 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2b3O09039 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2b3O09039 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sh2b3O09039 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh2b3O09039 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh2b3O09039 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh2b3O09039 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh2b3O09039 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.79■□□□□ 0.44
Sh2b3O09039 Gm43137-201ENSMUST00000198052 594 ntBASIC17.79■□□□□ 0.44
Sh2b3O09039 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.79■□□□□ 0.44
Sh2b3O09039 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh2b3O09039 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh2b3O09039 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Sh2b3O09039 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sh2b3O09039 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sh2b3O09039 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh2b3O09039 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Sh2b3O09039 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sh2b3O09039 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh2b3O09039 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.78■□□□□ 0.44
Sh2b3O09039 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh2b3O09039 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh2b3O09039 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sh2b3O09039 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sh2b3O09039 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh2b3O09039 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.77■□□□□ 0.44
Sh2b3O09039 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Sh2b3O09039 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Sh2b3O09039 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.77■□□□□ 0.44
Sh2b3O09039 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.77■□□□□ 0.44
Sh2b3O09039 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sh2b3O09039 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Sh2b3O09039 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sh2b3O09039 Gm6139-201ENSMUST00000079261 882 ntBASIC17.77■□□□□ 0.44
Sh2b3O09039 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh2b3O09039 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sh2b3O09039 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Sh2b3O09039 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh2b3O09039 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh2b3O09039 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh2b3O09039 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
Sh2b3O09039 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh2b3O09039 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh2b3O09039 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh2b3O09039 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh2b3O09039 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh2b3O09039 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh2b3O09039 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms