Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.82
Ift140E9PY46 AC115037.1-201ENSMUST00000223391 2173 ntBASIC32.69■■■□□ 2.82
Ift140E9PY46 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Ift140E9PY46 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Ift140E9PY46 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Ift140E9PY46 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
Ift140E9PY46 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
Ift140E9PY46 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC32.68■■■□□ 2.82
Ift140E9PY46 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Ift140E9PY46 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Ift140E9PY46 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Ift140E9PY46 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Ift140E9PY46 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC32.68■■■□□ 2.82
Ift140E9PY46 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Ift140E9PY46 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC32.68■■■□□ 2.82
Ift140E9PY46 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Ift140E9PY46 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Ift140E9PY46 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Ift140E9PY46 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Ift140E9PY46 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Ift140E9PY46 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Ift140E9PY46 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Ift140E9PY46 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Ift140E9PY46 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Ift140E9PY46 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Ift140E9PY46 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
Ift140E9PY46 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Ift140E9PY46 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC32.66■■■□□ 2.82
Ift140E9PY46 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC32.66■■■□□ 2.82
Ift140E9PY46 AC158538.1-201ENSMUST00000225870 294 ntBASIC32.66■■■□□ 2.82
Ift140E9PY46 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Ift140E9PY46 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC32.66■■■□□ 2.82
Ift140E9PY46 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Ift140E9PY46 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Ift140E9PY46 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC32.65■■■□□ 2.82
Ift140E9PY46 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC32.64■■■□□ 2.82
Ift140E9PY46 Gm3807-201ENSMUST00000193520 1168 ntBASIC32.64■■■□□ 2.82
Ift140E9PY46 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC32.64■■■□□ 2.82
Ift140E9PY46 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
Ift140E9PY46 Gm13168-201ENSMUST00000121771 632 ntBASIC32.63■■■□□ 2.81
Ift140E9PY46 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC32.63■■■□□ 2.81
Ift140E9PY46 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Ift140E9PY46 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC32.62■■■□□ 2.81
Ift140E9PY46 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Ift140E9PY46 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
Ift140E9PY46 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Ift140E9PY46 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Ift140E9PY46 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC32.61■■■□□ 2.81
Ift140E9PY46 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Ift140E9PY46 Gm7977-201ENSMUST00000193787 748 ntBASIC32.61■■■□□ 2.81
Ift140E9PY46 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
Ift140E9PY46 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Ift140E9PY46 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Ift140E9PY46 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC32.59■■■□□ 2.81
Ift140E9PY46 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC32.59■■■□□ 2.81
Ift140E9PY46 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Ift140E9PY46 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC32.59■■■□□ 2.81
Ift140E9PY46 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC32.58■■■□□ 2.81
Ift140E9PY46 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Ift140E9PY46 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC32.58■■■□□ 2.81
Ift140E9PY46 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Ift140E9PY46 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC32.57■■■□□ 2.81
Ift140E9PY46 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Ift140E9PY46 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC32.57■■■□□ 2.8
Ift140E9PY46 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC32.57■■■□□ 2.8
Ift140E9PY46 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
Ift140E9PY46 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
Ift140E9PY46 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC32.57■■■□□ 2.8
Ift140E9PY46 Gm20049-201ENSMUST00000219950 730 ntBASIC32.57■■■□□ 2.8
Ift140E9PY46 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Ift140E9PY46 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
Ift140E9PY46 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC32.56■■■□□ 2.8
Ift140E9PY46 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC32.55■■■□□ 2.8
Ift140E9PY46 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Ift140E9PY46 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Ift140E9PY46 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Ift140E9PY46 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Ift140E9PY46 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC32.54■■■□□ 2.8
Ift140E9PY46 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
Ift140E9PY46 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ift140E9PY46 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Ift140E9PY46 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Ift140E9PY46 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC32.53■■■□□ 2.8
Ift140E9PY46 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ift140E9PY46 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ift140E9PY46 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC32.53■■■□□ 2.8
Ift140E9PY46 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ift140E9PY46 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Ift140E9PY46 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC32.52■■■□□ 2.8
Ift140E9PY46 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Ift140E9PY46 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC32.52■■■□□ 2.8
Ift140E9PY46 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Ift140E9PY46 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Ift140E9PY46 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.8
Ift140E9PY46 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Ift140E9PY46 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC32.51■■■□□ 2.8
Ift140E9PY46 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Ift140E9PY46 Gm7290-201ENSMUST00000104990 617 ntBASIC32.51■■■□□ 2.79
Ift140E9PY46 Gm12918-201ENSMUST00000120234 636 ntBASIC32.51■■■□□ 2.79
Ift140E9PY46 Gm15710-201ENSMUST00000121821 636 ntBASIC32.51■■■□□ 2.79
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms