Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Shroom2A2ALU4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Shroom2A2ALU4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC32.7■■■□□ 2.83
Shroom2A2ALU4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Shroom2A2ALU4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
Shroom2A2ALU4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC32.69■■■□□ 2.82
Shroom2A2ALU4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC32.69■■■□□ 2.82
Shroom2A2ALU4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Shroom2A2ALU4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
Shroom2A2ALU4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Shroom2A2ALU4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Shroom2A2ALU4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC32.68■■■□□ 2.82
Shroom2A2ALU4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Shroom2A2ALU4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Shroom2A2ALU4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Shroom2A2ALU4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Shroom2A2ALU4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Shroom2A2ALU4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
Shroom2A2ALU4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC32.67■■■□□ 2.82
Shroom2A2ALU4 AC122769.4-201ENSMUST00000228166 901 ntBASIC32.67■■■□□ 2.82
Shroom2A2ALU4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Shroom2A2ALU4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Shroom2A2ALU4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Shroom2A2ALU4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
Shroom2A2ALU4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Shroom2A2ALU4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC32.67■■■□□ 2.82
Shroom2A2ALU4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Shroom2A2ALU4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Shroom2A2ALU4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Shroom2A2ALU4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Shroom2A2ALU4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
Shroom2A2ALU4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC32.66■■■□□ 2.82
Shroom2A2ALU4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC32.66■■■□□ 2.82
Shroom2A2ALU4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Shroom2A2ALU4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC32.66■■■□□ 2.82
Shroom2A2ALU4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC32.65■■■□□ 2.82
Shroom2A2ALU4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Shroom2A2ALU4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Shroom2A2ALU4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Shroom2A2ALU4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Shroom2A2ALU4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.64■■■□□ 2.82
Shroom2A2ALU4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC32.64■■■□□ 2.82
Shroom2A2ALU4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.64■■■□□ 2.82
Shroom2A2ALU4 Gm27045-201ENSMUST00000182145 1402 ntBASIC32.64■■■□□ 2.82
Shroom2A2ALU4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC32.64■■■□□ 2.82
Shroom2A2ALU4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC32.64■■■□□ 2.81
Shroom2A2ALU4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC32.63■■■□□ 2.81
Shroom2A2ALU4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Shroom2A2ALU4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Shroom2A2ALU4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC32.62■■■□□ 2.81
Shroom2A2ALU4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Shroom2A2ALU4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC32.61■■■□□ 2.81
Shroom2A2ALU4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Shroom2A2ALU4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC32.61■■■□□ 2.81
Shroom2A2ALU4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Shroom2A2ALU4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Shroom2A2ALU4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Shroom2A2ALU4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Shroom2A2ALU4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC32.59■■■□□ 2.81
Shroom2A2ALU4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
Shroom2A2ALU4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC32.59■■■□□ 2.81
Shroom2A2ALU4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Shroom2A2ALU4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC32.59■■■□□ 2.81
Shroom2A2ALU4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC32.59■■■□□ 2.81
Shroom2A2ALU4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC32.58■■■□□ 2.81
Shroom2A2ALU4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC32.58■■■□□ 2.81
Shroom2A2ALU4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Shroom2A2ALU4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
Shroom2A2ALU4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Shroom2A2ALU4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Shroom2A2ALU4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC32.57■■■□□ 2.8
Shroom2A2ALU4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC32.57■■■□□ 2.8
Shroom2A2ALU4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC32.57■■■□□ 2.8
Shroom2A2ALU4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Shroom2A2ALU4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.8
Shroom2A2ALU4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC32.57■■■□□ 2.8
Shroom2A2ALU4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC32.57■■■□□ 2.8
Shroom2A2ALU4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC32.57■■■□□ 2.8
Shroom2A2ALU4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
Shroom2A2ALU4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC32.56■■■□□ 2.8
Shroom2A2ALU4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Shroom2A2ALU4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC32.55■■■□□ 2.8
Shroom2A2ALU4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Shroom2A2ALU4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
Shroom2A2ALU4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Shroom2A2ALU4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Shroom2A2ALU4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Shroom2A2ALU4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Shroom2A2ALU4 Gm715-201ENSMUST00000117865 831 ntBASIC32.54■■■□□ 2.8
Shroom2A2ALU4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
Shroom2A2ALU4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
Shroom2A2ALU4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Shroom2A2ALU4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Shroom2A2ALU4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Shroom2A2ALU4 Gm6211-202ENSMUST00000167849 925 ntBASIC32.52■■■□□ 2.8
Shroom2A2ALU4 Gm6576-201ENSMUST00000169678 883 ntBASIC32.52■■■□□ 2.8
Shroom2A2ALU4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Shroom2A2ALU4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Shroom2A2ALU4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Shroom2A2ALU4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms