Protein–RNA interactions for Protein: A2AJK6

Chd7, Chromodomain-helicase-DNA-binding protein 7, mousemouse

Known RBP Predictions only

Length 2,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7A2AJK6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd7A2AJK6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.23■□□□□ 0.83
Chd7A2AJK6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd7A2AJK6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd7A2AJK6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd7A2AJK6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd7A2AJK6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd7A2AJK6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Chd7A2AJK6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd7A2AJK6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.23■□□□□ 0.83
Chd7A2AJK6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd7A2AJK6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd7A2AJK6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chd7A2AJK6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd7A2AJK6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chd7A2AJK6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd7A2AJK6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.22■□□□□ 0.83
Chd7A2AJK6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd7A2AJK6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd7A2AJK6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd7A2AJK6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Chd7A2AJK6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.22■□□□□ 0.83
Chd7A2AJK6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Chd7A2AJK6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd7A2AJK6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Chd7A2AJK6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.21■□□□□ 0.83
Chd7A2AJK6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd7A2AJK6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd7A2AJK6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd7A2AJK6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd7A2AJK6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd7A2AJK6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd7A2AJK6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd7A2AJK6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chd7A2AJK6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chd7A2AJK6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chd7A2AJK6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd7A2AJK6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd7A2AJK6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd7A2AJK6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Chd7A2AJK6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Chd7A2AJK6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd7A2AJK6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd7A2AJK6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Chd7A2AJK6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd7A2AJK6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd7A2AJK6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Chd7A2AJK6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.19■□□□□ 0.82
Chd7A2AJK6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd7A2AJK6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chd7A2AJK6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd7A2AJK6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd7A2AJK6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.18■□□□□ 0.82
Chd7A2AJK6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd7A2AJK6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Chd7A2AJK6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chd7A2AJK6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chd7A2AJK6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.18■□□□□ 0.82
Chd7A2AJK6 Gm20049-201ENSMUST00000219950 730 ntBASIC20.18■□□□□ 0.82
Chd7A2AJK6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd7A2AJK6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Chd7A2AJK6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd7A2AJK6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chd7A2AJK6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chd7A2AJK6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd7A2AJK6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chd7A2AJK6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.17■□□□□ 0.82
Chd7A2AJK6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chd7A2AJK6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd7A2AJK6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd7A2AJK6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chd7A2AJK6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd7A2AJK6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd7A2AJK6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.16■□□□□ 0.82
Chd7A2AJK6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd7A2AJK6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd7A2AJK6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Chd7A2AJK6 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.16■□□□□ 0.82
Chd7A2AJK6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chd7A2AJK6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd7A2AJK6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd7A2AJK6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd7A2AJK6 Gm27801-201ENSMUST00000184174 223 ntBASIC20.15■□□□□ 0.82
Chd7A2AJK6 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.15■□□□□ 0.82
Chd7A2AJK6 Gm37856-201ENSMUST00000191634 999 ntBASIC20.15■□□□□ 0.82
Chd7A2AJK6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chd7A2AJK6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Chd7A2AJK6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.14■□□□□ 0.82
Chd7A2AJK6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Chd7A2AJK6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd7A2AJK6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Chd7A2AJK6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Chd7A2AJK6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Chd7A2AJK6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chd7A2AJK6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd7A2AJK6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd7A2AJK6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd7A2AJK6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Chd7A2AJK6 Gm9988-201ENSMUST00000069786 435 ntBASIC20.13■□□□□ 0.81
Chd7A2AJK6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms