Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav11A0A0B4J1J9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav11A0A0B4J1J9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav11A0A0B4J1J9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav11A0A0B4J1J9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav11A0A0B4J1J9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav11A0A0B4J1J9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav11A0A0B4J1J9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav11A0A0B4J1J9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC13.78□□□□□ -0.2
Trav11A0A0B4J1J9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav11A0A0B4J1J9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav11A0A0B4J1J9 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.78□□□□□ -0.2
Trav11A0A0B4J1J9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav11A0A0B4J1J9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav11A0A0B4J1J9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav11A0A0B4J1J9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav11A0A0B4J1J9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav11A0A0B4J1J9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav11A0A0B4J1J9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav11A0A0B4J1J9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav11A0A0B4J1J9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav11A0A0B4J1J9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav11A0A0B4J1J9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav11A0A0B4J1J9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav11A0A0B4J1J9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav11A0A0B4J1J9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav11A0A0B4J1J9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav11A0A0B4J1J9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav11A0A0B4J1J9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav11A0A0B4J1J9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav11A0A0B4J1J9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav11A0A0B4J1J9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav11A0A0B4J1J9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav11A0A0B4J1J9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav11A0A0B4J1J9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav11A0A0B4J1J9 Gm14523-201ENSMUST00000117260 558 ntBASIC13.76□□□□□ -0.21
Trav11A0A0B4J1J9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav11A0A0B4J1J9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Trav11A0A0B4J1J9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav11A0A0B4J1J9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav11A0A0B4J1J9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav11A0A0B4J1J9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav11A0A0B4J1J9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav11A0A0B4J1J9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC13.76□□□□□ -0.21
Trav11A0A0B4J1J9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav11A0A0B4J1J9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav11A0A0B4J1J9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav11A0A0B4J1J9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav11A0A0B4J1J9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav11A0A0B4J1J9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav11A0A0B4J1J9 Gm37035-201ENSMUST00000194809 2148 ntBASIC13.75□□□□□ -0.21
Trav11A0A0B4J1J9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav11A0A0B4J1J9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav11A0A0B4J1J9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav11A0A0B4J1J9 Gm43592-201ENSMUST00000196922 1165 ntBASIC13.75□□□□□ -0.21
Trav11A0A0B4J1J9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trav11A0A0B4J1J9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav11A0A0B4J1J9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav11A0A0B4J1J9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav11A0A0B4J1J9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav11A0A0B4J1J9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Trav11A0A0B4J1J9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav11A0A0B4J1J9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav11A0A0B4J1J9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav11A0A0B4J1J9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav11A0A0B4J1J9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav11A0A0B4J1J9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav11A0A0B4J1J9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav11A0A0B4J1J9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav11A0A0B4J1J9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav11A0A0B4J1J9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav11A0A0B4J1J9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav11A0A0B4J1J9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav11A0A0B4J1J9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.73□□□□□ -0.21
Trav11A0A0B4J1J9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav11A0A0B4J1J9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav11A0A0B4J1J9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav11A0A0B4J1J9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav11A0A0B4J1J9 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.73□□□□□ -0.21
Trav11A0A0B4J1J9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Trav11A0A0B4J1J9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav11A0A0B4J1J9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav11A0A0B4J1J9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav11A0A0B4J1J9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav11A0A0B4J1J9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav11A0A0B4J1J9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav11A0A0B4J1J9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav11A0A0B4J1J9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav11A0A0B4J1J9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav11A0A0B4J1J9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav11A0A0B4J1J9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav11A0A0B4J1J9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav11A0A0B4J1J9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav11A0A0B4J1J9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav11A0A0B4J1J9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav11A0A0B4J1J9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav11A0A0B4J1J9 Dapk1-207ENSMUST00000226059 5009 ntBASIC13.72□□□□□ -0.21
Trav11A0A0B4J1J9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms