Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16nA0A075B634 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16nA0A075B634 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16nA0A075B634 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16nA0A075B634 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16nA0A075B634 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16nA0A075B634 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav16nA0A075B634 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav16nA0A075B634 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16nA0A075B634 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16nA0A075B634 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16nA0A075B634 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16nA0A075B634 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav16nA0A075B634 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16nA0A075B634 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16nA0A075B634 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16nA0A075B634 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16nA0A075B634 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16nA0A075B634 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.15■□□□□ 0.02
Trav16nA0A075B634 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16nA0A075B634 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16nA0A075B634 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16nA0A075B634 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16nA0A075B634 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16nA0A075B634 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16nA0A075B634 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16nA0A075B634 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav16nA0A075B634 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trav16nA0A075B634 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16nA0A075B634 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav16nA0A075B634 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16nA0A075B634 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16nA0A075B634 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav16nA0A075B634 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav16nA0A075B634 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16nA0A075B634 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16nA0A075B634 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16nA0A075B634 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav16nA0A075B634 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav16nA0A075B634 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav16nA0A075B634 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.14■□□□□ 0.01
Trav16nA0A075B634 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav16nA0A075B634 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Trav16nA0A075B634 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Trav16nA0A075B634 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav16nA0A075B634 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16nA0A075B634 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.14■□□□□ 0.01
Trav16nA0A075B634 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav16nA0A075B634 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16nA0A075B634 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Trav16nA0A075B634 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav16nA0A075B634 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16nA0A075B634 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav16nA0A075B634 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav16nA0A075B634 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16nA0A075B634 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16nA0A075B634 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16nA0A075B634 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16nA0A075B634 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav16nA0A075B634 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav16nA0A075B634 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav16nA0A075B634 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav16nA0A075B634 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav16nA0A075B634 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms