Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Mir8109-201ENSMUST00000184375 117 ntBASIC10.5□□□□□ -0.73
Ube4bQ9ES00 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Gm44364-201ENSMUST00000198368 141 ntBASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Gm45598-202ENSMUST00000210719 986 ntBASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Gm42460-201ENSMUST00000198863 2567 ntBASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Rprl1-202ENSMUST00000198476 238 ntBASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Gm3961-201ENSMUST00000204425 994 ntBASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Gzmn-202ENSMUST00000225535 989 ntBASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Mroh3-205ENSMUST00000212798 2933 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ube4bQ9ES00 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Gm11511-201ENSMUST00000118146 540 ntBASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Gm14381-201ENSMUST00000122105 414 ntBASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Gm32999-201ENSMUST00000192693 562 ntBASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Gm19287-201ENSMUST00000203190 358 ntBASIC10.48□□□□□ -0.73
Ube4bQ9ES00 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms