Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Platr10-202ENSMUST00000191479 818 ntBASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Trim29Q8R2Q0 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Gm25766-201ENSMUST00000104101 131 ntBASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Gm13284-201ENSMUST00000121020 547 ntBASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Gm43163-201ENSMUST00000196571 442 ntBASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Gm18042-201ENSMUST00000219887 790 ntBASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.53□□□□□ -0.4
Trim29Q8R2Q0 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim29Q8R2Q0 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim29Q8R2Q0 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim29Q8R2Q0 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim29Q8R2Q0 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim29Q8R2Q0 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trim29Q8R2Q0 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms