Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gm13996-201ENSMUST00000118456 430 ntBASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gm15374-201ENSMUST00000119313 844 ntBASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gm37666-201ENSMUST00000194110 866 ntBASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gm43433-201ENSMUST00000196573 481 ntBASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gm43058-201ENSMUST00000197645 625 ntBASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gm8913-201ENSMUST00000209491 641 ntBASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Cts7-204ENSMUST00000225321 1257 ntBASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gm25125-201ENSMUST00000083340 136 ntBASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gm4454-201ENSMUST00000190585 2578 ntBASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc28bQ8CEG5 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Gm4784-201ENSMUST00000117365 1824 ntBASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Gm23949-201ENSMUST00000104027 127 ntBASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Ap1g1-206ENSMUST00000179104 1096 ntBASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Gm27516-201ENSMUST00000184237 98 ntBASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Gm28746-201ENSMUST00000187453 380 ntBASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Mid1-202ENSMUST00000078947 3591 ntTSL 5 BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Cdkl1-201ENSMUST00000021377 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 259.5 ms