Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Gm11957-201ENSMUST00000118304 779 ntBASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Gm9916-201ENSMUST00000192943 1228 ntBASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Gm14113-201ENSMUST00000121399 976 ntBASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Gm9507-202ENSMUST00000180157 654 ntBASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Gm42433-201ENSMUST00000196806 940 ntBASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Gm29763-201ENSMUST00000205306 616 ntBASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Gm44605-201ENSMUST00000206892 949 ntBASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Gm45258-201ENSMUST00000210042 853 ntBASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Gm6478-201ENSMUST00000099450 742 ntBASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh3rf2Q8BZT2 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms