Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PtprkP35822 Gm12047-201ENSMUST00000117561 944 ntBASIC17.18■□□□□ 0.34
PtprkP35822 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC17.18■□□□□ 0.34
PtprkP35822 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PtprkP35822 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC17.18■□□□□ 0.34
PtprkP35822 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC17.18■□□□□ 0.34
PtprkP35822 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PtprkP35822 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC17.18■□□□□ 0.34
PtprkP35822 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PtprkP35822 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC17.18■□□□□ 0.34
PtprkP35822 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC17.18■□□□□ 0.34
PtprkP35822 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC17.18■□□□□ 0.34
PtprkP35822 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC17.18■□□□□ 0.34
PtprkP35822 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PtprkP35822 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PtprkP35822 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PtprkP35822 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PtprkP35822 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PtprkP35822 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PtprkP35822 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PtprkP35822 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PtprkP35822 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
PtprkP35822 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PtprkP35822 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC17.17■□□□□ 0.34
PtprkP35822 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PtprkP35822 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PtprkP35822 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PtprkP35822 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC17.17■□□□□ 0.34
PtprkP35822 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PtprkP35822 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PtprkP35822 Mir704-201ENSMUST00000102106 77 ntBASIC17.17■□□□□ 0.34
PtprkP35822 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC17.17■□□□□ 0.34
PtprkP35822 Gm12420-201ENSMUST00000119869 1048 ntBASIC17.17■□□□□ 0.34
PtprkP35822 Gm14524-201ENSMUST00000121066 683 ntBASIC17.17■□□□□ 0.34
PtprkP35822 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC17.17■□□□□ 0.34
PtprkP35822 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PtprkP35822 Gm21577-201ENSMUST00000190823 697 ntBASIC17.17■□□□□ 0.34
PtprkP35822 Gm20802-201ENSMUST00000190832 698 ntBASIC17.17■□□□□ 0.34
PtprkP35822 Gm4866-201ENSMUST00000197408 589 ntBASIC17.17■□□□□ 0.34
PtprkP35822 Gm34248-201ENSMUST00000200027 474 ntBASIC17.17■□□□□ 0.34
PtprkP35822 Gm45225-201ENSMUST00000206852 1139 ntBASIC17.17■□□□□ 0.34
PtprkP35822 Gm19090-201ENSMUST00000218187 774 ntBASIC17.17■□□□□ 0.34
PtprkP35822 AC149294.3-201ENSMUST00000226888 732 ntBASIC17.17■□□□□ 0.34
PtprkP35822 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PtprkP35822 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PtprkP35822 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PtprkP35822 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PtprkP35822 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PtprkP35822 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC17.17■□□□□ 0.34
PtprkP35822 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PtprkP35822 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
PtprkP35822 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Gm5766-202ENSMUST00000161633 799 ntBASIC17.16■□□□□ 0.34
PtprkP35822 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
PtprkP35822 Gm17797-201ENSMUST00000182175 997 ntBASIC17.16■□□□□ 0.34
PtprkP35822 Gm19798-201ENSMUST00000201502 457 ntBASIC17.16■□□□□ 0.34
PtprkP35822 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PtprkP35822 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC17.16■□□□□ 0.34
PtprkP35822 Mir194-2-201ENSMUST00000083648 86 ntBASIC17.16■□□□□ 0.34
PtprkP35822 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PtprkP35822 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PtprkP35822 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PtprkP35822 Gm28624-201ENSMUST00000186430 2131 ntBASIC17.16■□□□□ 0.34
PtprkP35822 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PtprkP35822 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PtprkP35822 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PtprkP35822 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
PtprkP35822 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PtprkP35822 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PtprkP35822 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PtprkP35822 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PtprkP35822 Gm15132-201ENSMUST00000118581 652 ntBASIC17.15■□□□□ 0.34
PtprkP35822 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PtprkP35822 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC17.15■□□□□ 0.34
PtprkP35822 AC166061.1-201ENSMUST00000225163 1138 ntBASIC17.15■□□□□ 0.34
PtprkP35822 AC174647.1-201ENSMUST00000227419 1271 ntBASIC17.15■□□□□ 0.34
PtprkP35822 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PtprkP35822 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PtprkP35822 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC17.15■□□□□ 0.34
PtprkP35822 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PtprkP35822 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC17.15■□□□□ 0.34
PtprkP35822 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
PtprkP35822 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms