Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nfkb1P25799 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.33□□□□□ -0.6
Nfkb1P25799 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Nfkb1P25799 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.32□□□□□ -0.6
Nfkb1P25799 Gm12463-201ENSMUST00000118271 849 ntBASIC11.32□□□□□ -0.6
Nfkb1P25799 Gm5257-201ENSMUST00000121823 790 ntBASIC11.32□□□□□ -0.6
Nfkb1P25799 Gm15620-201ENSMUST00000122949 270 ntBASIC11.32□□□□□ -0.6
Nfkb1P25799 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.32□□□□□ -0.6
Nfkb1P25799 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.32□□□□□ -0.6
Nfkb1P25799 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Gm4862-201ENSMUST00000170405 438 ntBASIC11.32□□□□□ -0.6
Nfkb1P25799 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Nfkb1P25799 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Nfkb1P25799 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nfkb1P25799 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.32□□□□□ -0.6
Nfkb1P25799 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC11.32□□□□□ -0.6
Nfkb1P25799 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Gm45500-201ENSMUST00000211676 803 ntBASIC11.32□□□□□ -0.6
Nfkb1P25799 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.32□□□□□ -0.6
Nfkb1P25799 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Nfkb1P25799 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.32□□□□□ -0.6
Nfkb1P25799 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Nfkb1P25799 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nfkb1P25799 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nfkb1P25799 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.31□□□□□ -0.6
Nfkb1P25799 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Nfkb1P25799 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nfkb1P25799 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Nfkb1P25799 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nfkb1P25799 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.31□□□□□ -0.6
Nfkb1P25799 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.31□□□□□ -0.6
Nfkb1P25799 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nfkb1P25799 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Nfkb1P25799 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.31□□□□□ -0.6
Nfkb1P25799 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.31□□□□□ -0.6
Nfkb1P25799 Gm11380-201ENSMUST00000118067 560 ntBASIC11.31□□□□□ -0.6
Nfkb1P25799 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.31□□□□□ -0.6
Nfkb1P25799 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Gm17214-201ENSMUST00000164501 541 ntBASIC11.31□□□□□ -0.6
Nfkb1P25799 Gm9372-201ENSMUST00000168454 430 ntBASIC11.31□□□□□ -0.6
Nfkb1P25799 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.31□□□□□ -0.6
Nfkb1P25799 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.31□□□□□ -0.6
Nfkb1P25799 Gm4903-201ENSMUST00000210462 405 ntBASIC11.31□□□□□ -0.6
Nfkb1P25799 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.31□□□□□ -0.6
Nfkb1P25799 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Nfkb1P25799 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.31□□□□□ -0.6
Nfkb1P25799 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.31□□□□□ -0.6
Nfkb1P25799 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.31□□□□□ -0.6
Nfkb1P25799 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nfkb1P25799 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Nfkb1P25799 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nfkb1P25799 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.31□□□□□ -0.6
Nfkb1P25799 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms