Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 AC156274.1-201ENSMUST00000219193 634 ntBASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Gm21818-202ENSMUST00000225144 894 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 AC129590.1-201ENSMUST00000225573 852 ntBASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 AC161877.1-201ENSMUST00000227736 699 ntBASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Gm2492-201ENSMUST00000221355 1394 ntBASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Gm24597-201ENSMUST00000122503 300 ntBASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Gm25319-201ENSMUST00000122552 325 ntBASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 4933406K04Rik-201ENSMUST00000124068 1136 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Gm12415-201ENSMUST00000141637 512 ntTSL 3 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Pon1-203ENSMUST00000176945 619 ntTSL 5 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Pea15b-202ENSMUST00000183185 555 ntBASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Gm19798-201ENSMUST00000201502 457 ntBASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Gm7565-201ENSMUST00000203611 623 ntBASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Gm3889-201ENSMUST00000212467 612 ntBASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Gm18119-201ENSMUST00000219972 616 ntBASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Gm18749-201ENSMUST00000222410 692 ntBASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Ermard-209ENSMUST00000226561 1019 ntBASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Olfr1512-201ENSMUST00000071221 942 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.08□□□□□ -0.64
Ccdc188F6WEU2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 AC154640.1-203ENSMUST00000228316 1618 ntBASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Hspa12b-202ENSMUST00000100763 628 ntTSL 2 BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Gm16329-201ENSMUST00000148174 371 ntBASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Gzmg-201ENSMUST00000015578 909 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Gm25770-201ENSMUST00000158566 115 ntBASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Scgb1b21-201ENSMUST00000170232 268 ntBASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Gm5696-201ENSMUST00000189850 552 ntBASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Gm43833-201ENSMUST00000198828 293 ntBASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Gm42441-201ENSMUST00000199778 748 ntBASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Gm9515-201ENSMUST00000200276 647 ntBASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 AC118476.4-201ENSMUST00000215385 790 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Atf7-201ENSMUST00000096143 390 ntBASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Olfr1057-201ENSMUST00000099892 948 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms