Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gm11475-201ENSMUST00000118482 476 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gm11354-201ENSMUST00000121974 422 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gm23647-201ENSMUST00000175042 109 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Rn5s-201ENSMUST00000177555 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gm22109-201ENSMUST00000177995 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gm22291-201ENSMUST00000178027 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gm23284-201ENSMUST00000178069 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gm25018-201ENSMUST00000179081 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gm25212-201ENSMUST00000179432 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gm26391-201ENSMUST00000179843 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Mir6923-201ENSMUST00000184592 72 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gm42751-201ENSMUST00000198065 559 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gm18042-201ENSMUST00000219887 790 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gm24089-201ENSMUST00000093696 109 ntBASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sh3rf2Q8BZT2 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Sh3rf2Q8BZT2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sh3rf2Q8BZT2 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Sh3rf2Q8BZT2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Sh3rf2Q8BZT2 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Sh3rf2Q8BZT2 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.15□□□□□ -0.63
Sh3rf2Q8BZT2 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sh3rf2Q8BZT2 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sh3rf2Q8BZT2 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Sh3rf2Q8BZT2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.14□□□□□ -0.63
Sh3rf2Q8BZT2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms