Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm24891-201ENSMUST00000104391 136 ntBASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm12106-201ENSMUST00000116006 1200 ntBASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm25668-201ENSMUST00000157700 129 ntBASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm37284-201ENSMUST00000193607 539 ntBASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm8574-201ENSMUST00000203207 924 ntBASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm44506-201ENSMUST00000206278 965 ntBASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm28624-201ENSMUST00000186430 2131 ntBASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.81□□□□□ -0.68
Scaf4Q6PFF0 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms