Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Gm44597-202ENSMUST00000203287 3516 ntTSL 2 BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Oc90-201ENSMUST00000060522 1909 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Gm4454-201ENSMUST00000190585 2578 ntBASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 D030018L15Rik-202ENSMUST00000139808 1859 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Rnf220Q6PDX6 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Rnf220Q6PDX6 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rnf220Q6PDX6 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Osbpl5-201ENSMUST00000020411 3994 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Wdr78-202ENSMUST00000036557 3479 ntTSL 5 BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Gm15004-201ENSMUST00000119192 630 ntBASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Mir7085-201ENSMUST00000184353 66 ntBASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Rprl1-202ENSMUST00000198476 238 ntBASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Gzmn-202ENSMUST00000225535 989 ntBASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Ptrh2-202ENSMUST00000108022 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 F730016J06Rik-203ENSMUST00000156508 2593 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Gm37798-201ENSMUST00000193026 2169 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 AC144938.1-201ENSMUST00000223994 2167 ntBASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Vmn2r-ps97-201ENSMUST00000222427 1970 ntBASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 D030055H07Rik-201ENSMUST00000143956 2712 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Slc2a1-201ENSMUST00000030398 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Ccdc33-210ENSMUST00000215944 3012 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Rnf220Q6PDX6 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Dlgap4-202ENSMUST00000070782 3303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Gm26947-201ENSMUST00000182497 2929 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 9230112E08Rik-202ENSMUST00000189441 3352 ntBASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Gm26286-201ENSMUST00000104166 134 ntBASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Gm13183-201ENSMUST00000118615 789 ntBASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Gm32999-201ENSMUST00000192693 562 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms