Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Gm16071-201ENSMUST00000119589 793 ntBASIC12.49□□□□□ -0.41
Gm28047Q3US59 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.49□□□□□ -0.41
Gm28047Q3US59 Gm17826-201ENSMUST00000189720 798 ntBASIC12.49□□□□□ -0.41
Gm28047Q3US59 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.49□□□□□ -0.41
Gm28047Q3US59 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Gm5865-201ENSMUST00000198713 637 ntBASIC12.49□□□□□ -0.41
Gm28047Q3US59 Gm43378-201ENSMUST00000199336 582 ntBASIC12.49□□□□□ -0.41
Gm28047Q3US59 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Gm44980-201ENSMUST00000205826 314 ntBASIC12.49□□□□□ -0.41
Gm28047Q3US59 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm28047Q3US59 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.49□□□□□ -0.41
Gm28047Q3US59 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.49□□□□□ -0.41
Gm28047Q3US59 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm28047Q3US59 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.49□□□□□ -0.41
Gm28047Q3US59 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Gm20426-201ENSMUST00000173657 440 ntBASIC12.48□□□□□ -0.41
Gm28047Q3US59 Mir3547-201ENSMUST00000175461 88 ntBASIC12.48□□□□□ -0.41
Gm28047Q3US59 Gm37299-201ENSMUST00000193951 826 ntBASIC12.48□□□□□ -0.41
Gm28047Q3US59 Gm9132-201ENSMUST00000210182 832 ntBASIC12.48□□□□□ -0.41
Gm28047Q3US59 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.48□□□□□ -0.41
Gm28047Q3US59 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28047Q3US59 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm28047Q3US59 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.47□□□□□ -0.41
Gm28047Q3US59 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Gm25343-201ENSMUST00000157460 107 ntBASIC12.47□□□□□ -0.41
Gm28047Q3US59 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC12.47□□□□□ -0.41
Gm28047Q3US59 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Gm37852-201ENSMUST00000193027 350 ntBASIC12.47□□□□□ -0.41
Gm28047Q3US59 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC12.47□□□□□ -0.41
Gm28047Q3US59 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.47□□□□□ -0.41
Gm28047Q3US59 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Gm19327-201ENSMUST00000220651 3271 ntBASIC12.47□□□□□ -0.41
Gm28047Q3US59 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms