Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
GabpaQ00422 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GabpaQ00422 Gm24074-201ENSMUST00000158178 260 ntBASIC12.48□□□□□ -0.41
GabpaQ00422 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC12.48□□□□□ -0.41
GabpaQ00422 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GabpaQ00422 Gm37723-201ENSMUST00000194480 565 ntBASIC12.48□□□□□ -0.41
GabpaQ00422 Gm43564-201ENSMUST00000196185 211 ntBASIC12.48□□□□□ -0.41
GabpaQ00422 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.48□□□□□ -0.41
GabpaQ00422 BC080696-201ENSMUST00000202858 1218 ntBASIC12.48□□□□□ -0.41
GabpaQ00422 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
GabpaQ00422 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GabpaQ00422 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC12.48□□□□□ -0.41
GabpaQ00422 Gm45094-201ENSMUST00000207013 617 ntBASIC12.48□□□□□ -0.41
GabpaQ00422 Gm8170-201ENSMUST00000218581 945 ntBASIC12.48□□□□□ -0.41
GabpaQ00422 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GabpaQ00422 Gm18042-201ENSMUST00000219887 790 ntBASIC12.48□□□□□ -0.41
GabpaQ00422 AC154407.1-201ENSMUST00000226777 526 ntBASIC12.48□□□□□ -0.41
GabpaQ00422 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GabpaQ00422 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GabpaQ00422 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GabpaQ00422 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GabpaQ00422 AC022682.1-201ENSMUST00000224624 2023 ntBASIC12.48□□□□□ -0.41
GabpaQ00422 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GabpaQ00422 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GabpaQ00422 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GabpaQ00422 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
GabpaQ00422 Gm42858-201ENSMUST00000202512 1704 ntBASIC12.48□□□□□ -0.41
GabpaQ00422 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GabpaQ00422 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GabpaQ00422 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GabpaQ00422 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GabpaQ00422 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.48□□□□□ -0.41
GabpaQ00422 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.48□□□□□ -0.41
GabpaQ00422 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.47□□□□□ -0.41
GabpaQ00422 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
GabpaQ00422 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
GabpaQ00422 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
GabpaQ00422 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.47□□□□□ -0.41
GabpaQ00422 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC12.47□□□□□ -0.41
GabpaQ00422 Gm22594-201ENSMUST00000104251 130 ntBASIC12.47□□□□□ -0.41
GabpaQ00422 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC12.47□□□□□ -0.41
GabpaQ00422 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC12.47□□□□□ -0.41
GabpaQ00422 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC12.47□□□□□ -0.41
GabpaQ00422 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.47□□□□□ -0.41
GabpaQ00422 Gm6439-201ENSMUST00000199849 862 ntBASIC12.47□□□□□ -0.41
GabpaQ00422 Gm2448-201ENSMUST00000207080 559 ntBASIC12.47□□□□□ -0.41
GabpaQ00422 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 AC137871.1-201ENSMUST00000228278 475 ntBASIC12.47□□□□□ -0.41
GabpaQ00422 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.47□□□□□ -0.41
GabpaQ00422 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
GabpaQ00422 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.47□□□□□ -0.41
GabpaQ00422 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
GabpaQ00422 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.47□□□□□ -0.41
GabpaQ00422 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.47□□□□□ -0.41
GabpaQ00422 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GabpaQ00422 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
GabpaQ00422 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GabpaQ00422 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GabpaQ00422 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GabpaQ00422 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.46□□□□□ -0.41
GabpaQ00422 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GabpaQ00422 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
GabpaQ00422 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.46□□□□□ -0.41
GabpaQ00422 Rgr-203ENSMUST00000225070 4704 ntBASIC12.46□□□□□ -0.41
GabpaQ00422 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GabpaQ00422 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GabpaQ00422 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
GabpaQ00422 Gm43547-201ENSMUST00000197729 328 ntBASIC12.46□□□□□ -0.41
GabpaQ00422 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.46□□□□□ -0.41
GabpaQ00422 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GabpaQ00422 AC164556.1-201ENSMUST00000221318 751 ntBASIC12.46□□□□□ -0.41
GabpaQ00422 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.46□□□□□ -0.41
GabpaQ00422 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GabpaQ00422 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
GabpaQ00422 Gm9791-201ENSMUST00000060997 447 ntBASIC12.46□□□□□ -0.41
GabpaQ00422 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GabpaQ00422 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
GabpaQ00422 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
GabpaQ00422 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms