Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Smarcc1P97496 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Smarcc1P97496 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.81□□□□□ -0.2
Smarcc1P97496 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Smarcc1P97496 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Smarcc1P97496 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.8□□□□□ -0.2
Smarcc1P97496 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Smarcc1P97496 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.8□□□□□ -0.2
Smarcc1P97496 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Smarcc1P97496 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC13.8□□□□□ -0.2
Smarcc1P97496 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Gm5764-201ENSMUST00000118817 885 ntBASIC13.8□□□□□ -0.2
Smarcc1P97496 Gm14006-201ENSMUST00000122132 981 ntBASIC13.8□□□□□ -0.2
Smarcc1P97496 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC13.8□□□□□ -0.2
Smarcc1P97496 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC13.8□□□□□ -0.2
Smarcc1P97496 Gm17944-201ENSMUST00000186351 643 ntBASIC13.8□□□□□ -0.2
Smarcc1P97496 Gm37858-201ENSMUST00000192759 1231 ntBASIC13.8□□□□□ -0.2
Smarcc1P97496 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Gm3527-201ENSMUST00000198905 460 ntBASIC13.8□□□□□ -0.2
Smarcc1P97496 Gm17936-201ENSMUST00000199413 988 ntBASIC13.8□□□□□ -0.2
Smarcc1P97496 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
Smarcc1P97496 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC13.8□□□□□ -0.2
Smarcc1P97496 AC118639.1-202ENSMUST00000226957 653 ntBASIC13.8□□□□□ -0.2
Smarcc1P97496 CT010505.2-201ENSMUST00000227918 998 ntBASIC13.8□□□□□ -0.2
Smarcc1P97496 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Smarcc1P97496 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Smarcc1P97496 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.8□□□□□ -0.2
Smarcc1P97496 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.8□□□□□ -0.2
Smarcc1P97496 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Smarcc1P97496 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Smarcc1P97496 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcc1P97496 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.79□□□□□ -0.2
Smarcc1P97496 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Smarcc1P97496 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Gm13192-201ENSMUST00000101199 208 ntBASIC13.79□□□□□ -0.2
Smarcc1P97496 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Smarcc1P97496 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Smarcc1P97496 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC13.79□□□□□ -0.2
Smarcc1P97496 Gm10443-201ENSMUST00000119024 210 ntBASIC13.79□□□□□ -0.2
Smarcc1P97496 Gm12736-201ENSMUST00000119330 236 ntBASIC13.79□□□□□ -0.2
Smarcc1P97496 Gm13281-201ENSMUST00000120871 567 ntBASIC13.79□□□□□ -0.2
Smarcc1P97496 Gm13688-201ENSMUST00000121557 608 ntBASIC13.79□□□□□ -0.2
Smarcc1P97496 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC13.79□□□□□ -0.2
Smarcc1P97496 Gm15258-201ENSMUST00000153801 741 ntBASIC13.79□□□□□ -0.2
Smarcc1P97496 Gm25394-201ENSMUST00000157338 133 ntBASIC13.79□□□□□ -0.2
Smarcc1P97496 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC13.79□□□□□ -0.2
Smarcc1P97496 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC13.79□□□□□ -0.2
Smarcc1P97496 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC13.79□□□□□ -0.2
Smarcc1P97496 Gm20568-201ENSMUST00000197129 208 ntBASIC13.79□□□□□ -0.2
Smarcc1P97496 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC13.79□□□□□ -0.2
Smarcc1P97496 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Smarcc1P97496 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Gm10238-201ENSMUST00000089689 408 ntBASIC13.79□□□□□ -0.2
Smarcc1P97496 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.79□□□□□ -0.2
Smarcc1P97496 Gm7405-201ENSMUST00000121476 1337 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms