Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC17.68■□□□□ 0.42
Cux2P70298 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Gm44159-201ENSMUST00000204065 442 ntBASIC17.68■□□□□ 0.42
Cux2P70298 Gm18646-201ENSMUST00000212240 1063 ntBASIC17.68■□□□□ 0.42
Cux2P70298 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC17.68■□□□□ 0.42
Cux2P70298 AC124581.2-201ENSMUST00000225459 282 ntBASIC17.68■□□□□ 0.42
Cux2P70298 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC17.68■□□□□ 0.42
Cux2P70298 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cux2P70298 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Zscan5b-203ENSMUST00000165445 1407 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Cux2P70298 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cux2P70298 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cux2P70298 AC154575.1-201ENSMUST00000227166 1474 ntBASIC17.67■□□□□ 0.42
Cux2P70298 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cux2P70298 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cux2P70298 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cux2P70298 Olfr281-201ENSMUST00000109163 1058 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cux2P70298 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cux2P70298 4933439K11Rik-202ENSMUST00000140307 941 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cux2P70298 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC17.67■□□□□ 0.42
Cux2P70298 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cux2P70298 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cux2P70298 Rpl15-ps3-201ENSMUST00000088480 615 ntBASIC17.67■□□□□ 0.42
Cux2P70298 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cux2P70298 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cux2P70298 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cux2P70298 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cux2P70298 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cux2P70298 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cux2P70298 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC17.67■□□□□ 0.42
Cux2P70298 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cux2P70298 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC17.67■□□□□ 0.42
Cux2P70298 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cux2P70298 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Cux2P70298 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cux2P70298 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Cux2P70298 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cux2P70298 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cux2P70298 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cux2P70298 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cux2P70298 Deup1-203ENSMUST00000115593 3019 ntTSL 5 BASIC17.66■□□□□ 0.42
Cux2P70298 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cux2P70298 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cux2P70298 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cux2P70298 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cux2P70298 Mir704-201ENSMUST00000102106 77 ntBASIC17.66■□□□□ 0.42
Cux2P70298 Gm15353-201ENSMUST00000110860 702 ntTSL 5 BASIC17.66■□□□□ 0.42
Cux2P70298 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC17.66■□□□□ 0.42
Cux2P70298 Gm24074-201ENSMUST00000158178 260 ntBASIC17.66■□□□□ 0.42
Cux2P70298 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Cux2P70298 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC17.66■□□□□ 0.42
Cux2P70298 Gm46189-201ENSMUST00000219395 644 ntTSL 3 BASIC17.66■□□□□ 0.42
Cux2P70298 Rce1-203ENSMUST00000224707 1255 ntBASIC17.66■□□□□ 0.42
Cux2P70298 AC149294.3-201ENSMUST00000226888 732 ntBASIC17.66■□□□□ 0.42
Cux2P70298 AC161581.1-201ENSMUST00000228696 318 ntBASIC17.66■□□□□ 0.42
Cux2P70298 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC17.66■□□□□ 0.42
Cux2P70298 Tmem29-201ENSMUST00000059256 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cux2P70298 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cux2P70298 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cux2P70298 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cux2P70298 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cux2P70298 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cux2P70298 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cux2P70298 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
Cux2P70298 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cux2P70298 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cux2P70298 Gm43365-201ENSMUST00000196522 2106 ntBASIC17.66■□□□□ 0.42
Cux2P70298 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cux2P70298 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cux2P70298 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cux2P70298 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cux2P70298 Gm44975-201ENSMUST00000207435 1390 ntBASIC17.66■□□□□ 0.42
Cux2P70298 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cux2P70298 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cux2P70298 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cux2P70298 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cux2P70298 Gm12529-201ENSMUST00000119529 268 ntBASIC17.65■□□□□ 0.42
Cux2P70298 Il24-201ENSMUST00000121040 1159 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cux2P70298 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC17.65■□□□□ 0.42
Cux2P70298 Gm26913-201ENSMUST00000182391 732 ntBASIC17.65■□□□□ 0.42
Cux2P70298 AC134607.1-201ENSMUST00000214707 485 ntBASIC17.65■□□□□ 0.42
Cux2P70298 AC140426.1-201ENSMUST00000227933 459 ntBASIC17.65■□□□□ 0.42
Cux2P70298 n-R5s25-201ENSMUST00000082923 119 ntBASIC17.65■□□□□ 0.42
Cux2P70298 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cux2P70298 Ntrk2-209ENSMUST00000225950 2640 ntBASIC17.65■□□□□ 0.42
Cux2P70298 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cux2P70298 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cux2P70298 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC17.65■□□□□ 0.42
Cux2P70298 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cux2P70298 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cux2P70298 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cux2P70298 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cux2P70298 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cux2P70298 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms