Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hmgb1P63158 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hmgb1P63158 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Hmgb1P63158 Gm8737-201ENSMUST00000122208 642 ntBASIC12.17□□□□□ -0.46
Hmgb1P63158 Gm22144-201ENSMUST00000157402 102 ntBASIC12.17□□□□□ -0.46
Hmgb1P63158 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.17□□□□□ -0.46
Hmgb1P63158 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.17□□□□□ -0.46
Hmgb1P63158 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.17□□□□□ -0.46
Hmgb1P63158 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.17□□□□□ -0.46
Hmgb1P63158 Gm5468-202ENSMUST00000227851 682 ntBASIC12.17□□□□□ -0.46
Hmgb1P63158 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.17□□□□□ -0.46
Hmgb1P63158 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Hmgb1P63158 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hmgb1P63158 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hmgb1P63158 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hmgb1P63158 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hmgb1P63158 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.17□□□□□ -0.46
Hmgb1P63158 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hmgb1P63158 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.17□□□□□ -0.46
Hmgb1P63158 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hmgb1P63158 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.16□□□□□ -0.46
Hmgb1P63158 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Hmgb1P63158 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Hmgb1P63158 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Hmgb1P63158 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC12.16□□□□□ -0.46
Hmgb1P63158 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.16□□□□□ -0.46
Hmgb1P63158 Gm4909-201ENSMUST00000118749 794 ntBASIC12.16□□□□□ -0.46
Hmgb1P63158 Gm4917-201ENSMUST00000121452 650 ntBASIC12.16□□□□□ -0.46
Hmgb1P63158 Gm23699-201ENSMUST00000158835 135 ntBASIC12.16□□□□□ -0.46
Hmgb1P63158 Gm23045-201ENSMUST00000175041 96 ntBASIC12.16□□□□□ -0.46
Hmgb1P63158 Gm4654-201ENSMUST00000183305 982 ntBASIC12.16□□□□□ -0.46
Hmgb1P63158 Mir6420-201ENSMUST00000185032 102 ntBASIC12.16□□□□□ -0.46
Hmgb1P63158 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.16□□□□□ -0.46
Hmgb1P63158 Gm28195-201ENSMUST00000186992 372 ntBASIC12.16□□□□□ -0.46
Hmgb1P63158 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.16□□□□□ -0.46
Hmgb1P63158 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.16□□□□□ -0.46
Hmgb1P63158 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.16□□□□□ -0.46
Hmgb1P63158 AC134913.1-201ENSMUST00000224563 504 ntBASIC12.16□□□□□ -0.46
Hmgb1P63158 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hmgb1P63158 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hmgb1P63158 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.16□□□□□ -0.46
Hmgb1P63158 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgb1P63158 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hmgb1P63158 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 4930470B04Rik-201ENSMUST00000192005 1926 ntBASIC12.15□□□□□ -0.46
Hmgb1P63158 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.15□□□□□ -0.46
Hmgb1P63158 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hmgb1P63158 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.15□□□□□ -0.46
Hmgb1P63158 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Hmgb1P63158 Gm43750-201ENSMUST00000199027 2493 ntBASIC12.15□□□□□ -0.46
Hmgb1P63158 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.15□□□□□ -0.46
Hmgb1P63158 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Hmgb1P63158 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hmgb1P63158 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.15□□□□□ -0.46
Hmgb1P63158 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.15□□□□□ -0.46
Hmgb1P63158 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hmgb1P63158 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC12.15□□□□□ -0.46
Hmgb1P63158 Gm12165-201ENSMUST00000117047 342 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms