Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
Rpl39P62892 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC7.77□□□□□ -1.17
Rpl39P62892 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
Rpl39P62892 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Rpl39P62892 Gm25148-201ENSMUST00000104611 123 ntBASIC7.77□□□□□ -1.17
Rpl39P62892 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Rpl39P62892 Gm15329-201ENSMUST00000121408 155 ntBASIC7.77□□□□□ -1.17
Rpl39P62892 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Rpl39P62892 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC7.77□□□□□ -1.17
Rpl39P62892 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC7.77□□□□□ -1.17
Rpl39P62892 Cd63-ps-202ENSMUST00000154992 717 ntBASIC7.77□□□□□ -1.17
Rpl39P62892 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC7.77□□□□□ -1.17
Rpl39P62892 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC7.77□□□□□ -1.17
Rpl39P62892 H2-Q3-201ENSMUST00000172583 608 ntBASIC7.77□□□□□ -1.17
Rpl39P62892 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC7.77□□□□□ -1.17
Rpl39P62892 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Rpl39P62892 Gm43058-201ENSMUST00000197645 625 ntBASIC7.77□□□□□ -1.17
Rpl39P62892 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Gm42859-201ENSMUST00000199572 193 ntBASIC7.77□□□□□ -1.17
Rpl39P62892 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC7.77□□□□□ -1.17
Rpl39P62892 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC7.77□□□□□ -1.17
Rpl39P62892 Gm270-201ENSMUST00000223010 976 ntBASIC7.77□□□□□ -1.17
Rpl39P62892 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC7.77□□□□□ -1.17
Rpl39P62892 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC7.77□□□□□ -1.17
Rpl39P62892 Gm10686-201ENSMUST00000215389 3247 ntBASIC7.77□□□□□ -1.17
Rpl39P62892 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC7.77□□□□□ -1.17
Rpl39P62892 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Gm45165-201ENSMUST00000207763 1631 ntBASIC7.77□□□□□ -1.17
Rpl39P62892 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Rpl39P62892 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC7.76□□□□□ -1.17
Rpl39P62892 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rpl39P62892 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rpl39P62892 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC7.76□□□□□ -1.17
Rpl39P62892 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Rpl39P62892 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Rpl39P62892 Gm9244-201ENSMUST00000056767 2129 ntBASIC7.76□□□□□ -1.17
Rpl39P62892 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Rpl39P62892 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC7.76□□□□□ -1.17
Rpl39P62892 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Rpl39P62892 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Rpl39P62892 Gm37264-201ENSMUST00000194916 2192 ntBASIC7.76□□□□□ -1.17
Rpl39P62892 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rpl39P62892 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rpl39P62892 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC7.76□□□□□ -1.17
Rpl39P62892 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Rpl39P62892 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Rpl39P62892 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rpl39P62892 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rpl39P62892 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC7.76□□□□□ -1.17
Rpl39P62892 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rpl39P62892 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC7.76□□□□□ -1.17
Rpl39P62892 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC7.76□□□□□ -1.17
Rpl39P62892 AA914427-201ENSMUST00000193194 1166 ntBASIC7.76□□□□□ -1.17
Rpl39P62892 Gm18038-201ENSMUST00000197900 485 ntBASIC7.76□□□□□ -1.17
Rpl39P62892 Gm43667-201ENSMUST00000198616 1095 ntBASIC7.76□□□□□ -1.17
Rpl39P62892 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rpl39P62892 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rpl39P62892 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC7.76□□□□□ -1.17
Rpl39P62892 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Rpl39P62892 Gm21027-201ENSMUST00000219300 1236 ntBASIC7.76□□□□□ -1.17
Rpl39P62892 AC140375.2-201ENSMUST00000225283 584 ntBASIC7.76□□□□□ -1.17
Rpl39P62892 AC164437.3-201ENSMUST00000228323 347 ntBASIC7.76□□□□□ -1.17
Rpl39P62892 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rpl39P62892 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rpl39P62892 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Rpl39P62892 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms