Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
ClgnP52194 Gm15617-201ENSMUST00000118973 771 ntBASIC11.28□□□□□ -0.6
ClgnP52194 Gm15549-201ENSMUST00000121595 622 ntBASIC11.28□□□□□ -0.6
ClgnP52194 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.28□□□□□ -0.6
ClgnP52194 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.28□□□□□ -0.6
ClgnP52194 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Gm8574-201ENSMUST00000203207 924 ntBASIC11.28□□□□□ -0.6
ClgnP52194 Gm45398-201ENSMUST00000210561 165 ntBASIC11.28□□□□□ -0.6
ClgnP52194 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.28□□□□□ -0.6
ClgnP52194 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.28□□□□□ -0.6
ClgnP52194 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.28□□□□□ -0.6
ClgnP52194 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
ClgnP52194 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
ClgnP52194 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.28□□□□□ -0.6
ClgnP52194 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.28□□□□□ -0.6
ClgnP52194 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.28□□□□□ -0.6
ClgnP52194 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
ClgnP52194 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
ClgnP52194 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ClgnP52194 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.27□□□□□ -0.6
ClgnP52194 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
ClgnP52194 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
ClgnP52194 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.27□□□□□ -0.6
ClgnP52194 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
ClgnP52194 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
ClgnP52194 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC11.27□□□□□ -0.6
ClgnP52194 AC131029.1-201ENSMUST00000226391 2929 ntBASIC11.27□□□□□ -0.6
ClgnP52194 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
ClgnP52194 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
ClgnP52194 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.27□□□□□ -0.61
ClgnP52194 Gm15374-201ENSMUST00000119313 844 ntBASIC11.27□□□□□ -0.61
ClgnP52194 Gm13408-201ENSMUST00000119822 798 ntBASIC11.27□□□□□ -0.61
ClgnP52194 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.27□□□□□ -0.61
ClgnP52194 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.27□□□□□ -0.61
ClgnP52194 Gm13935-201ENSMUST00000121859 798 ntBASIC11.27□□□□□ -0.61
ClgnP52194 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
ClgnP52194 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.27□□□□□ -0.61
ClgnP52194 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.27□□□□□ -0.61
ClgnP52194 Gm4654-201ENSMUST00000183305 982 ntBASIC11.27□□□□□ -0.61
ClgnP52194 Mir7070-201ENSMUST00000183657 86 ntBASIC11.27□□□□□ -0.61
ClgnP52194 Gm7504-201ENSMUST00000201449 424 ntBASIC11.27□□□□□ -0.61
ClgnP52194 Gm43916-201ENSMUST00000205062 967 ntBASIC11.27□□□□□ -0.61
ClgnP52194 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.27□□□□□ -0.61
ClgnP52194 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
ClgnP52194 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
ClgnP52194 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
ClgnP52194 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.27□□□□□ -0.61
ClgnP52194 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
ClgnP52194 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
ClgnP52194 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.27□□□□□ -0.61
ClgnP52194 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
ClgnP52194 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.27□□□□□ -0.61
ClgnP52194 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClgnP52194 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClgnP52194 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClgnP52194 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClgnP52194 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
ClgnP52194 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClgnP52194 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClgnP52194 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
ClgnP52194 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClgnP52194 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.26□□□□□ -0.61
ClgnP52194 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClgnP52194 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClgnP52194 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.26□□□□□ -0.61
ClgnP52194 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.26□□□□□ -0.61
ClgnP52194 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.26□□□□□ -0.61
ClgnP52194 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.26□□□□□ -0.61
ClgnP52194 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClgnP52194 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms