Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.35□□□□□ -0.59
Nfkb1P25799 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.35□□□□□ -0.59
Nfkb1P25799 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nfkb1P25799 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.35□□□□□ -0.59
Nfkb1P25799 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.34□□□□□ -0.59
Nfkb1P25799 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nfkb1P25799 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nfkb1P25799 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nfkb1P25799 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nfkb1P25799 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Gm14234-201ENSMUST00000119539 845 ntBASIC11.34□□□□□ -0.59
Nfkb1P25799 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.34□□□□□ -0.59
Nfkb1P25799 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.34□□□□□ -0.59
Nfkb1P25799 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nfkb1P25799 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.34□□□□□ -0.59
Nfkb1P25799 Gm31274-201ENSMUST00000197356 229 ntBASIC11.34□□□□□ -0.59
Nfkb1P25799 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.34□□□□□ -0.59
Nfkb1P25799 Gm43249-201ENSMUST00000200464 458 ntBASIC11.34□□□□□ -0.59
Nfkb1P25799 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.34□□□□□ -0.59
Nfkb1P25799 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nfkb1P25799 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.34□□□□□ -0.59
Nfkb1P25799 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.34□□□□□ -0.59
Nfkb1P25799 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.34□□□□□ -0.59
Nfkb1P25799 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nfkb1P25799 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nfkb1P25799 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Nfkb1P25799 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
Nfkb1P25799 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nfkb1P25799 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.33□□□□□ -0.6
Nfkb1P25799 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nfkb1P25799 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.33□□□□□ -0.6
Nfkb1P25799 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.33□□□□□ -0.6
Nfkb1P25799 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nfkb1P25799 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nfkb1P25799 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.33□□□□□ -0.6
Nfkb1P25799 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.33□□□□□ -0.6
Nfkb1P25799 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Nfkb1P25799 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Nfkb1P25799 Gm11578-201ENSMUST00000118530 459 ntBASIC11.33□□□□□ -0.6
Nfkb1P25799 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Nfkb1P25799 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Gm17070-201ENSMUST00000170463 784 ntBASIC11.33□□□□□ -0.6
Nfkb1P25799 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.33□□□□□ -0.6
Nfkb1P25799 Gm34379-201ENSMUST00000195036 290 ntBASIC11.33□□□□□ -0.6
Nfkb1P25799 Gm17889-201ENSMUST00000198410 598 ntBASIC11.33□□□□□ -0.6
Nfkb1P25799 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Nfkb1P25799 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.33□□□□□ -0.6
Nfkb1P25799 Gm5178-201ENSMUST00000219380 898 ntBASIC11.33□□□□□ -0.6
Nfkb1P25799 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nfkb1P25799 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms