Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Gm13792-201ENSMUST00000121350 423 ntBASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Gm43997-201ENSMUST00000203986 1005 ntBASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Gm4705-201ENSMUST00000177415 354 ntBASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Gm17944-201ENSMUST00000186351 643 ntBASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Gm4430-202ENSMUST00000193902 1041 ntBASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Gm43117-201ENSMUST00000198531 379 ntBASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc180J3QNE4 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Gm19178-201ENSMUST00000217524 1819 ntBASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Gm5174-201ENSMUST00000171131 1423 ntBASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Gm45124-201ENSMUST00000206723 2755 ntBASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Gm45481-201ENSMUST00000209717 877 ntBASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Gm3791-201ENSMUST00000220790 768 ntBASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 AC102327.1-201ENSMUST00000226389 742 ntBASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc180J3QNE4 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Gm6755-201ENSMUST00000100598 864 ntBASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Gm6740-201ENSMUST00000100617 864 ntBASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Gm13281-201ENSMUST00000120871 567 ntBASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Gm4775-201ENSMUST00000169588 402 ntBASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Gm37597-201ENSMUST00000191853 382 ntBASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Fut8-202ENSMUST00000171770 2765 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Gm21631-201ENSMUST00000195041 754 ntBASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Gm18539-201ENSMUST00000204745 1090 ntBASIC19.78■□□□□ 0.76
Ccdc180J3QNE4 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms