Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Gm16166-201ENSMUST00000118291 787 ntBASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Mir1896-201ENSMUST00000122641 81 ntBASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Gm28032-201ENSMUST00000184104 96 ntBASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.29□□□□□ -0.44
Ccdc38Q8CDN8 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm11949-201ENSMUST00000117640 372 ntBASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm4726-201ENSMUST00000135604 736 ntBASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm6019-201ENSMUST00000148369 736 ntBASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm27441-201ENSMUST00000185000 105 ntBASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm37597-201ENSMUST00000191853 382 ntBASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm30946-201ENSMUST00000198288 724 ntBASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm17831-201ENSMUST00000205579 900 ntBASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Spcs1-203ENSMUST00000226374 592 ntBASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm25125-201ENSMUST00000083340 136 ntBASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms