Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Gm9135-201ENSMUST00000182963 990 ntBASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Gm9369-201ENSMUST00000196009 733 ntBASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Gm3793-201ENSMUST00000204973 672 ntBASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Id2-203ENSMUST00000222667 958 ntBASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Tnfaip3Q60769 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm12791-201ENSMUST00000120788 655 ntBASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm9081-201ENSMUST00000182346 991 ntBASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm43671-201ENSMUST00000200422 433 ntBASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm19091-201ENSMUST00000208120 978 ntBASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.42□□□□□ -0.74
Tnfaip3Q60769 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms