Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm11660-201ENSMUST00000120955 412 ntBASIC9.22□□□□□ -0.93
Npas1P97459 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.22□□□□□ -0.93
Npas1P97459 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC9.22□□□□□ -0.93
Npas1P97459 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.22□□□□□ -0.93
Npas1P97459 Gm2991-201ENSMUST00000173338 480 ntBASIC9.22□□□□□ -0.93
Npas1P97459 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Npas1P97459 Gm27046-201ENSMUST00000182160 463 ntBASIC9.22□□□□□ -0.93
Npas1P97459 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC9.22□□□□□ -0.93
Npas1P97459 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC9.22□□□□□ -0.93
Npas1P97459 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.22□□□□□ -0.93
Npas1P97459 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.22□□□□□ -0.93
Npas1P97459 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC9.22□□□□□ -0.93
Npas1P97459 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC9.22□□□□□ -0.93
Npas1P97459 Gm7940-201ENSMUST00000218195 769 ntBASIC9.22□□□□□ -0.93
Npas1P97459 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Npas1P97459 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC9.22□□□□□ -0.93
Npas1P97459 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Gm44597-202ENSMUST00000203287 3516 ntTSL 2 BASIC9.22□□□□□ -0.93
Npas1P97459 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Parp10-201ENSMUST00000075689 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Gm4784-201ENSMUST00000117365 1824 ntBASIC9.21□□□□□ -0.93
Npas1P97459 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Npas1P97459 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Npas1P97459 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Npas1P97459 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.21□□□□□ -0.93
Npas1P97459 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Npas1P97459 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC9.21□□□□□ -0.93
Npas1P97459 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Npas1P97459 Rdh9-201ENSMUST00000052652 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Npas1P97459 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Npas1P97459 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Npas1P97459 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Npas1P97459 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Npas1P97459 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Npas1P97459 Gm4810-201ENSMUST00000177721 1607 ntBASIC9.21□□□□□ -0.93
Npas1P97459 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Npas1P97459 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.93
Npas1P97459 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Npas1P97459 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.21□□□□□ -0.94
Npas1P97459 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
Npas1P97459 Gm11509-201ENSMUST00000117358 325 ntBASIC9.21□□□□□ -0.94
Npas1P97459 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.21□□□□□ -0.94
Npas1P97459 Gm20495-201ENSMUST00000173902 235 ntBASIC9.21□□□□□ -0.94
Npas1P97459 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Npas1P97459 Rps4l-202ENSMUST00000204242 789 ntBASIC9.21□□□□□ -0.94
Npas1P97459 Gm18935-201ENSMUST00000212692 664 ntBASIC9.21□□□□□ -0.94
Npas1P97459 Gm9797-202ENSMUST00000218003 294 ntBASIC9.21□□□□□ -0.94
Npas1P97459 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Npas1P97459 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Npas1P97459 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Npas1P97459 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Npas1P97459 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Npas1P97459 Gm42979-201ENSMUST00000196287 2228 ntBASIC9.21□□□□□ -0.94
Npas1P97459 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Npas1P97459 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Npas1P97459 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Npas1P97459 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Npas1P97459 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.21□□□□□ -0.94
Npas1P97459 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.94
Npas1P97459 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.21□□□□□ -0.94
Npas1P97459 Gm43820-201ENSMUST00000199414 3346 ntBASIC9.21□□□□□ -0.94
Npas1P97459 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Npas1P97459 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.21□□□□□ -0.94
Npas1P97459 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Npas1P97459 Vmn2r-ps97-201ENSMUST00000222427 1970 ntBASIC9.21□□□□□ -0.94
Npas1P97459 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Npas1P97459 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Npas1P97459 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Npas1P97459 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Npas1P97459 Gm9860-201ENSMUST00000211426 3653 ntBASIC9.2□□□□□ -0.94
Npas1P97459 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Npas1P97459 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Npas1P97459 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Npas1P97459 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Npas1P97459 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Npas1P97459 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Npas1P97459 9230112E08Rik-202ENSMUST00000189441 3352 ntBASIC9.2□□□□□ -0.94
Npas1P97459 Gm43817-201ENSMUST00000196459 2262 ntBASIC9.2□□□□□ -0.94
Npas1P97459 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Npas1P97459 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.2□□□□□ -0.94
Npas1P97459 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms