Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
SgcaP82350 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.23□□□□□ -0.93
SgcaP82350 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SgcaP82350 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.23□□□□□ -0.93
SgcaP82350 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Gm38357-201ENSMUST00000195382 2464 ntBASIC9.23□□□□□ -0.93
SgcaP82350 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 AC158779.1-201ENSMUST00000228912 3861 ntBASIC9.23□□□□□ -0.93
SgcaP82350 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.23□□□□□ -0.93
SgcaP82350 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC9.22□□□□□ -0.93
SgcaP82350 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC9.22□□□□□ -0.93
SgcaP82350 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Gm43307-201ENSMUST00000199465 2371 ntBASIC9.22□□□□□ -0.93
SgcaP82350 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9.22□□□□□ -0.93
SgcaP82350 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.22□□□□□ -0.93
SgcaP82350 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC9.22□□□□□ -0.93
SgcaP82350 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
SgcaP82350 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.22□□□□□ -0.93
SgcaP82350 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
SgcaP82350 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC9.22□□□□□ -0.93
SgcaP82350 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.22□□□□□ -0.93
SgcaP82350 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.22□□□□□ -0.93
SgcaP82350 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Gm20495-201ENSMUST00000173902 235 ntBASIC9.22□□□□□ -0.93
SgcaP82350 Gm4310-201ENSMUST00000177847 889 ntBASIC9.22□□□□□ -0.93
SgcaP82350 Gm4857-201ENSMUST00000192718 785 ntBASIC9.22□□□□□ -0.93
SgcaP82350 Gm38002-201ENSMUST00000193255 180 ntBASIC9.22□□□□□ -0.93
SgcaP82350 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC9.22□□□□□ -0.93
SgcaP82350 Gm30285-201ENSMUST00000214614 422 ntBASIC9.22□□□□□ -0.93
SgcaP82350 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
SgcaP82350 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Zbtb8b-202ENSMUST00000106046 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
SgcaP82350 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
SgcaP82350 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SgcaP82350 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SgcaP82350 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SgcaP82350 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.21□□□□□ -0.93
SgcaP82350 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
SgcaP82350 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
SgcaP82350 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SgcaP82350 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
SgcaP82350 Cd8a-201ENSMUST00000066747 3128 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
SgcaP82350 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
SgcaP82350 Fhod1-201ENSMUST00000014922 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SgcaP82350 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
SgcaP82350 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
SgcaP82350 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.93
SgcaP82350 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
SgcaP82350 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC9.21□□□□□ -0.94
SgcaP82350 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.21□□□□□ -0.94
SgcaP82350 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Gm7150-201ENSMUST00000122032 981 ntBASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms