Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ybx1P62960 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ybx1P62960 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ybx1P62960 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Ybx1P62960 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.32□□□□□ -0.6
Ybx1P62960 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ybx1P62960 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.32□□□□□ -0.6
Ybx1P62960 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.31□□□□□ -0.6
Ybx1P62960 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.31□□□□□ -0.6
Ybx1P62960 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Ybx1P62960 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.31□□□□□ -0.6
Ybx1P62960 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ybx1P62960 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ybx1P62960 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ybx1P62960 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.31□□□□□ -0.6
Ybx1P62960 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.31□□□□□ -0.6
Ybx1P62960 Gm12745-201ENSMUST00000121767 214 ntBASIC11.31□□□□□ -0.6
Ybx1P62960 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC11.31□□□□□ -0.6
Ybx1P62960 Gm13827-201ENSMUST00000148801 372 ntBASIC11.31□□□□□ -0.6
Ybx1P62960 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ybx1P62960 Gm7069-201ENSMUST00000182418 1008 ntBASIC11.31□□□□□ -0.6
Ybx1P62960 Gm18014-201ENSMUST00000183369 817 ntBASIC11.31□□□□□ -0.6
Ybx1P62960 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC11.31□□□□□ -0.6
Ybx1P62960 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.31□□□□□ -0.6
Ybx1P62960 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.31□□□□□ -0.6
Ybx1P62960 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.31□□□□□ -0.6
Ybx1P62960 Gm45258-201ENSMUST00000210042 853 ntBASIC11.31□□□□□ -0.6
Ybx1P62960 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 CT030135.2-201ENSMUST00000225255 893 ntBASIC11.31□□□□□ -0.6
Ybx1P62960 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.31□□□□□ -0.6
Ybx1P62960 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ybx1P62960 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ybx1P62960 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Ybx1P62960 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
Ybx1P62960 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.31□□□□□ -0.6
Ybx1P62960 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Ybx1P62960 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ybx1P62960 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.3□□□□□ -0.6
Ybx1P62960 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Ybx1P62960 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Ybx1P62960 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.3□□□□□ -0.6
Ybx1P62960 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.3□□□□□ -0.6
Ybx1P62960 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Ybx1P62960 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Ybx1P62960 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.3□□□□□ -0.6
Ybx1P62960 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.3□□□□□ -0.6
Ybx1P62960 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.3□□□□□ -0.6
Ybx1P62960 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.3□□□□□ -0.6
Ybx1P62960 Gm44605-201ENSMUST00000206892 949 ntBASIC11.3□□□□□ -0.6
Ybx1P62960 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.3□□□□□ -0.6
Ybx1P62960 Gm19324-201ENSMUST00000213229 1169 ntBASIC11.3□□□□□ -0.6
Ybx1P62960 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.3□□□□□ -0.6
Ybx1P62960 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.3□□□□□ -0.6
Ybx1P62960 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.3□□□□□ -0.6
Ybx1P62960 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Gm10254-201ENSMUST00000052888 867 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms