Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
LtbrP50284 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
LtbrP50284 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LtbrP50284 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LtbrP50284 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LtbrP50284 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LtbrP50284 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LtbrP50284 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
LtbrP50284 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LtbrP50284 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LtbrP50284 Gm13744-201ENSMUST00000118953 850 ntBASIC13.2□□□□□ -0.3
LtbrP50284 Gm15815-201ENSMUST00000120569 255 ntBASIC13.2□□□□□ -0.3
LtbrP50284 Gm11960-201ENSMUST00000122068 925 ntBASIC13.2□□□□□ -0.3
LtbrP50284 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 Gm23694-201ENSMUST00000179335 110 ntBASIC13.2□□□□□ -0.3
LtbrP50284 Gm6114-201ENSMUST00000182472 968 ntBASIC13.2□□□□□ -0.3
LtbrP50284 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
LtbrP50284 Gm29036-201ENSMUST00000189967 877 ntBASIC13.2□□□□□ -0.3
LtbrP50284 Gm18348-201ENSMUST00000191227 820 ntBASIC13.2□□□□□ -0.3
LtbrP50284 Gm37207-201ENSMUST00000194284 296 ntBASIC13.2□□□□□ -0.3
LtbrP50284 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC13.2□□□□□ -0.3
LtbrP50284 Gm38314-201ENSMUST00000195709 625 ntBASIC13.2□□□□□ -0.3
LtbrP50284 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.2□□□□□ -0.3
LtbrP50284 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 CT025526.1-201ENSMUST00000217327 267 ntBASIC13.2□□□□□ -0.3
LtbrP50284 AC153544.1-201ENSMUST00000217988 400 ntBASIC13.2□□□□□ -0.3
LtbrP50284 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LtbrP50284 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LtbrP50284 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
LtbrP50284 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LtbrP50284 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LtbrP50284 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LtbrP50284 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LtbrP50284 Gm26831-201ENSMUST00000181458 1380 ntBASIC13.2□□□□□ -0.3
LtbrP50284 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Gm43216-201ENSMUST00000196295 1333 ntBASIC13.19□□□□□ -0.3
LtbrP50284 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LtbrP50284 Gm14833-201ENSMUST00000118345 1027 ntBASIC13.19□□□□□ -0.3
LtbrP50284 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.19□□□□□ -0.3
LtbrP50284 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC13.19□□□□□ -0.3
LtbrP50284 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC13.19□□□□□ -0.3
LtbrP50284 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC13.19□□□□□ -0.3
LtbrP50284 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC13.19□□□□□ -0.3
LtbrP50284 Gm7211-201ENSMUST00000172692 1118 ntBASIC13.19□□□□□ -0.3
LtbrP50284 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC13.19□□□□□ -0.3
LtbrP50284 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC13.19□□□□□ -0.3
LtbrP50284 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.19□□□□□ -0.3
LtbrP50284 Gm9931-201ENSMUST00000193584 1185 ntBASIC13.19□□□□□ -0.3
LtbrP50284 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC13.19□□□□□ -0.3
LtbrP50284 Gm29755-201ENSMUST00000196976 948 ntBASIC13.19□□□□□ -0.3
LtbrP50284 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.19□□□□□ -0.3
LtbrP50284 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.19□□□□□ -0.3
LtbrP50284 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC13.19□□□□□ -0.3
LtbrP50284 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
LtbrP50284 AC174797.4-201ENSMUST00000225510 347 ntBASIC13.19□□□□□ -0.3
LtbrP50284 AC102847.1-202ENSMUST00000226313 1245 ntBASIC13.19□□□□□ -0.3
LtbrP50284 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Gm6478-201ENSMUST00000099450 742 ntBASIC13.19□□□□□ -0.3
LtbrP50284 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LtbrP50284 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
LtbrP50284 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.19□□□□□ -0.3
LtbrP50284 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.19□□□□□ -0.3
LtbrP50284 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
LtbrP50284 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LtbrP50284 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LtbrP50284 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LtbrP50284 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LtbrP50284 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LtbrP50284 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LtbrP50284 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LtbrP50284 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms