Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdx2P43241 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cdx2P43241 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cdx2P43241 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.49□□□□□ -0.73
Cdx2P43241 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.49□□□□□ -0.73
Cdx2P43241 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Gm11919-201ENSMUST00000117609 721 ntBASIC10.49□□□□□ -0.73
Cdx2P43241 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cdx2P43241 Gm16441-201ENSMUST00000138176 924 ntBASIC10.49□□□□□ -0.73
Cdx2P43241 Gm6038-201ENSMUST00000154310 948 ntBASIC10.49□□□□□ -0.73
Cdx2P43241 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC10.49□□□□□ -0.73
Cdx2P43241 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Cdx2P43241 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Cdx2P43241 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC10.49□□□□□ -0.73
Cdx2P43241 Gm45893-201ENSMUST00000211899 247 ntBASIC10.49□□□□□ -0.73
Cdx2P43241 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdx2P43241 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC10.49□□□□□ -0.73
Cdx2P43241 Gm10254-201ENSMUST00000052888 867 ntBASIC10.49□□□□□ -0.73
Cdx2P43241 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Cdx2P43241 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC10.49□□□□□ -0.73
Cdx2P43241 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cdx2P43241 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Gm37160-201ENSMUST00000193081 1689 ntBASIC10.49□□□□□ -0.73
Cdx2P43241 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.49□□□□□ -0.73
Cdx2P43241 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cdx2P43241 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Cdx2P43241 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdx2P43241 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdx2P43241 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdx2P43241 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.48□□□□□ -0.73
Cdx2P43241 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.48□□□□□ -0.73
Cdx2P43241 Mir744-201ENSMUST00000103261 100 ntBASIC10.48□□□□□ -0.73
Cdx2P43241 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Gm24294-201ENSMUST00000158295 277 ntBASIC10.48□□□□□ -0.73
Cdx2P43241 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cdx2P43241 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cdx2P43241 Mir8111-201ENSMUST00000184463 137 ntBASIC10.48□□□□□ -0.73
Cdx2P43241 Gm6644-201ENSMUST00000186507 951 ntBASIC10.48□□□□□ -0.73
Cdx2P43241 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Gm38349-201ENSMUST00000195732 462 ntBASIC10.48□□□□□ -0.73
Cdx2P43241 Gm30055-201ENSMUST00000203175 803 ntBASIC10.48□□□□□ -0.73
Cdx2P43241 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdx2P43241 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 AC134913.2-201ENSMUST00000225017 771 ntBASIC10.48□□□□□ -0.73
Cdx2P43241 Arhgef33-210ENSMUST00000225548 456 ntBASIC10.48□□□□□ -0.73
Cdx2P43241 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cdx2P43241 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Cdx2P43241 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdx2P43241 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC10.48□□□□□ -0.73
Cdx2P43241 AC166361.2-201ENSMUST00000219269 1415 ntBASIC10.48□□□□□ -0.73
Cdx2P43241 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Cdx2P43241 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.48□□□□□ -0.73
Cdx2P43241 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Cdx2P43241 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms