Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm5340-201ENSMUST00000203733 880 ntBASIC12.64□□□□□ -0.39
Vcam1P29533 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC12.64□□□□□ -0.39
Vcam1P29533 Gm45745-201ENSMUST00000211447 1180 ntBASIC12.64□□□□□ -0.39
Vcam1P29533 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC12.64□□□□□ -0.39
Vcam1P29533 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.64□□□□□ -0.39
Vcam1P29533 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vcam1P29533 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vcam1P29533 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vcam1P29533 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.64□□□□□ -0.39
Vcam1P29533 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.63□□□□□ -0.39
Vcam1P29533 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vcam1P29533 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vcam1P29533 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.63□□□□□ -0.39
Vcam1P29533 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.63□□□□□ -0.39
Vcam1P29533 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vcam1P29533 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vcam1P29533 Gm7572-201ENSMUST00000182616 766 ntBASIC12.63□□□□□ -0.39
Vcam1P29533 Mir8111-201ENSMUST00000184463 137 ntBASIC12.63□□□□□ -0.39
Vcam1P29533 Gm27316-201ENSMUST00000184884 277 ntBASIC12.63□□□□□ -0.39
Vcam1P29533 Gm37207-201ENSMUST00000194284 296 ntBASIC12.63□□□□□ -0.39
Vcam1P29533 Gm6794-201ENSMUST00000203829 457 ntBASIC12.63□□□□□ -0.39
Vcam1P29533 Wbp1-209ENSMUST00000205023 716 ntBASIC12.63□□□□□ -0.39
Vcam1P29533 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC12.63□□□□□ -0.39
Vcam1P29533 AC154806.7-201ENSMUST00000227998 202 ntBASIC12.63□□□□□ -0.39
Vcam1P29533 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Mir326-201ENSMUST00000083637 95 ntBASIC12.63□□□□□ -0.39
Vcam1P29533 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.63□□□□□ -0.39
Vcam1P29533 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Vcam1P29533 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcam1P29533 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vcam1P29533 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.62□□□□□ -0.39
Vcam1P29533 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vcam1P29533 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC12.62□□□□□ -0.39
Vcam1P29533 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Vcam1P29533 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.62□□□□□ -0.39
Vcam1P29533 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Gm20493-201ENSMUST00000173706 213 ntBASIC12.62□□□□□ -0.39
Vcam1P29533 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC12.62□□□□□ -0.39
Vcam1P29533 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.62□□□□□ -0.39
Vcam1P29533 Gm7445-201ENSMUST00000192115 340 ntBASIC12.62□□□□□ -0.39
Vcam1P29533 Gm18555-201ENSMUST00000197935 584 ntBASIC12.62□□□□□ -0.39
Vcam1P29533 Gm42779-201ENSMUST00000198807 406 ntBASIC12.62□□□□□ -0.39
Vcam1P29533 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 CT009713.2-201ENSMUST00000225532 1149 ntBASIC12.62□□□□□ -0.39
Vcam1P29533 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC12.62□□□□□ -0.39
Vcam1P29533 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vcam1P29533 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.62□□□□□ -0.39
Vcam1P29533 Gm25125-201ENSMUST00000083340 136 ntBASIC12.62□□□□□ -0.39
Vcam1P29533 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.62□□□□□ -0.39
Vcam1P29533 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Vcam1P29533 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vcam1P29533 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vcam1P29533 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms