Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rb1P13405 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rb1P13405 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rb1P13405 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rb1P13405 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rb1P13405 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rb1P13405 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rb1P13405 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Rb1P13405 Spata33-207ENSMUST00000212760 4074 ntBASIC11.4□□□□□ -0.59
Rb1P13405 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Rb1P13405 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rb1P13405 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rb1P13405 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rb1P13405 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rb1P13405 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.39□□□□□ -0.59
Rb1P13405 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.39□□□□□ -0.59
Rb1P13405 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rb1P13405 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rb1P13405 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rb1P13405 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Rb1P13405 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rb1P13405 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rb1P13405 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Rb1P13405 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.39□□□□□ -0.59
Rb1P13405 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rb1P13405 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.39□□□□□ -0.59
Rb1P13405 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rb1P13405 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Rb1P13405 Gm7902-201ENSMUST00000198842 947 ntBASIC11.39□□□□□ -0.59
Rb1P13405 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.39□□□□□ -0.59
Rb1P13405 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.39□□□□□ -0.59
Rb1P13405 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.39□□□□□ -0.59
Rb1P13405 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.39□□□□□ -0.59
Rb1P13405 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.39□□□□□ -0.59
Rb1P13405 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.39□□□□□ -0.59
Rb1P13405 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.39□□□□□ -0.59
Rb1P13405 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.39□□□□□ -0.59
Rb1P13405 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Rb1P13405 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Rb1P13405 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rb1P13405 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Rb1P13405 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Rb1P13405 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rb1P13405 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rb1P13405 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rb1P13405 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rb1P13405 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Rb1P13405 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.38□□□□□ -0.59
Rb1P13405 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rb1P13405 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rb1P13405 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rb1P13405 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rb1P13405 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rb1P13405 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rb1P13405 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rb1P13405 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.38□□□□□ -0.59
Rb1P13405 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
Rb1P13405 Rgr-203ENSMUST00000225070 4704 ntBASIC11.38□□□□□ -0.59
Rb1P13405 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rb1P13405 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.38□□□□□ -0.59
Rb1P13405 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.38□□□□□ -0.59
Rb1P13405 Gm14270-201ENSMUST00000118388 846 ntBASIC11.38□□□□□ -0.59
Rb1P13405 Gm12036-201ENSMUST00000120008 530 ntBASIC11.38□□□□□ -0.59
Rb1P13405 Gm12783-201ENSMUST00000121425 397 ntBASIC11.38□□□□□ -0.59
Rb1P13405 Gm12030-201ENSMUST00000121917 223 ntBASIC11.38□□□□□ -0.59
Rb1P13405 Gm22146-201ENSMUST00000157397 288 ntBASIC11.38□□□□□ -0.59
Rb1P13405 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rb1P13405 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.38□□□□□ -0.59
Rb1P13405 Gm6114-201ENSMUST00000182472 968 ntBASIC11.38□□□□□ -0.59
Rb1P13405 Gm9192-201ENSMUST00000183221 985 ntBASIC11.38□□□□□ -0.59
Rb1P13405 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.38□□□□□ -0.59
Rb1P13405 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms