Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Gm26013-201ENSMUST00000104404 119 ntBASIC12.01□□□□□ -0.49
Chmp6P0C0A3 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Gm29787-201ENSMUST00000222129 849 ntBASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Gm38273-201ENSMUST00000194987 2382 ntBASIC12□□□□□ -0.49
Chmp6P0C0A3 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Chmp6P0C0A3 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12□□□□□ -0.49
Chmp6P0C0A3 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 AC154171.2-201ENSMUST00000225219 2652 ntBASIC12□□□□□ -0.49
Chmp6P0C0A3 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12□□□□□ -0.49
Chmp6P0C0A3 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Chmp6P0C0A3 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12□□□□□ -0.49
Chmp6P0C0A3 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12□□□□□ -0.49
Chmp6P0C0A3 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chmp6P0C0A3 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12□□□□□ -0.49
Chmp6P0C0A3 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Gm29067-201ENSMUST00000190821 470 ntBASIC12□□□□□ -0.49
Chmp6P0C0A3 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Gm10829-201ENSMUST00000202084 2988 ntBASIC12□□□□□ -0.49
Chmp6P0C0A3 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12□□□□□ -0.49
Chmp6P0C0A3 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12□□□□□ -0.49
Chmp6P0C0A3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12□□□□□ -0.49
Chmp6P0C0A3 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chmp6P0C0A3 Gm13384-201ENSMUST00000117166 1344 ntBASIC12□□□□□ -0.49
Chmp6P0C0A3 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chmp6P0C0A3 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chmp6P0C0A3 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Chmp6P0C0A3 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12□□□□□ -0.49
Chmp6P0C0A3 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chmp6P0C0A3 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12□□□□□ -0.49
Chmp6P0C0A3 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp6P0C0A3 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Gm12218-201ENSMUST00000117666 399 ntBASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Gm8302-201ENSMUST00000119217 852 ntBASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms