Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1aQ9QWF0 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1aQ9QWF0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1aQ9QWF0 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Chaf1aQ9QWF0 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1aQ9QWF0 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1aQ9QWF0 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 AC154528.2-201ENSMUST00000228432 3023 ntBASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Gm7851-201ENSMUST00000117574 323 ntBASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Gm8111-201ENSMUST00000117659 987 ntBASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Gm23085-201ENSMUST00000157849 293 ntBASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Gm12407-201ENSMUST00000180219 324 ntBASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Gm18212-201ENSMUST00000211678 889 ntBASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Ntng1-201ENSMUST00000051253 327 ntBASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1aQ9QWF0 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm24891-201ENSMUST00000104391 136 ntBASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm14028-201ENSMUST00000117434 479 ntBASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm15374-201ENSMUST00000119313 844 ntBASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm12266-201ENSMUST00000120311 962 ntBASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm24844-201ENSMUST00000158679 127 ntBASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm18367-201ENSMUST00000176139 600 ntBASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm29499-201ENSMUST00000189151 486 ntBASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm28329-201ENSMUST00000191208 689 ntBASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm29171-201ENSMUST00000191397 486 ntBASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 AU022133-201ENSMUST00000200601 873 ntBASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm6108-201ENSMUST00000208365 367 ntBASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1aQ9QWF0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms