Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Gja10-202ENSMUST00000219644 1857 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Gm26583-201ENSMUST00000181436 3684 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Mis18bp1-201ENSMUST00000052201 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Ptpn5-202ENSMUST00000102626 3137 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Gm42765-202ENSMUST00000200017 3131 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Gm15264-201ENSMUST00000118050 502 ntBASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Gm11988-201ENSMUST00000122321 1069 ntBASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Gm24513-201ENSMUST00000174964 138 ntBASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Gm27618-201ENSMUST00000183671 60 ntBASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Gm37042-201ENSMUST00000193816 581 ntBASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Gm17794-201ENSMUST00000220252 955 ntBASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Epb41-206ENSMUST00000105974 4844 ntTSL 5 BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Eif2d-201ENSMUST00000068791 3316 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Bcas1-201ENSMUST00000013667 2916 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Gm43764-201ENSMUST00000202553 3172 ntBASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Btg4-201ENSMUST00000114431 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Nasp-202ENSMUST00000030457 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gtf2a1Q99PM3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Sorbs2-228ENSMUST00000153798 2667 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 4930526F13Rik-201ENSMUST00000144718 1721 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Gm42515-201ENSMUST00000199936 3583 ntBASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 A430078G23Rik-201ENSMUST00000098966 2945 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Gm37446-201ENSMUST00000193015 4136 ntBASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Myrf-205ENSMUST00000189897 3339 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Pkd2l1-201ENSMUST00000042026 3321 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Gm28988-201ENSMUST00000191363 1897 ntTSL 5 BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Gm7435-202ENSMUST00000216003 2424 ntBASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Gm6498-201ENSMUST00000181413 1006 ntBASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Gm27321-201ENSMUST00000185021 205 ntBASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 AC162934.2-201ENSMUST00000221451 249 ntBASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Tmem63c-203ENSMUST00000146292 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Nup107-201ENSMUST00000064848 3114 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Pde4d-209ENSMUST00000122041 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Synm-203ENSMUST00000207102 3388 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Slc25a35-201ENSMUST00000018884 3648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Srsf7-201ENSMUST00000063417 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Smg7-202ENSMUST00000073441 5767 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gtf2a1Q99PM3 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gtf2a1Q99PM3 Gramd1b-203ENSMUST00000119373 3857 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gtf2a1Q99PM3 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms