Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Gm25125-201ENSMUST00000083340 136 ntBASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim29Q8R2Q0 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Gm9133-201ENSMUST00000118289 540 ntBASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Gm9550-201ENSMUST00000161130 862 ntBASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim29Q8R2Q0 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Gm14592-201ENSMUST00000117201 560 ntBASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Gm12986-201ENSMUST00000119037 967 ntBASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Gm23771-201ENSMUST00000178702 110 ntBASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Gm28032-201ENSMUST00000184104 96 ntBASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Gm37299-201ENSMUST00000193951 826 ntBASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Gm37458-201ENSMUST00000194055 410 ntBASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms