Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc85bQ6PDY0 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc85bQ6PDY0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccdc85bQ6PDY0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc85bQ6PDY0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccdc85bQ6PDY0 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc85bQ6PDY0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc85bQ6PDY0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc85bQ6PDY0 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc85bQ6PDY0 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Mir598-201ENSMUST00000102094 79 ntBASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gm15636-201ENSMUST00000119205 668 ntBASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gm6291-201ENSMUST00000179994 309 ntBASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gm6114-201ENSMUST00000182472 968 ntBASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gm37723-201ENSMUST00000194480 565 ntBASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gm30946-201ENSMUST00000198288 724 ntBASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gm43966-201ENSMUST00000203301 612 ntBASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gm6794-201ENSMUST00000203829 457 ntBASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 AC102523.1-201ENSMUST00000228706 1144 ntBASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc85bQ6PDY0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Gm12947-201ENSMUST00000116114 420 ntBASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Gm16441-201ENSMUST00000138176 924 ntBASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Mir1941-201ENSMUST00000157834 83 ntBASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Gm25591-201ENSMUST00000177317 94 ntBASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Gm29067-201ENSMUST00000190821 470 ntBASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 AC107711.4-201ENSMUST00000228948 440 ntBASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc85bQ6PDY0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms