Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Osbpl5-202ENSMUST00000119499 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Ophn1-202ENSMUST00000113826 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 Pear1-216ENSMUST00000174759 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf220Q6PDX6 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Gm12709-201ENSMUST00000149348 1912 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Btn1a1-201ENSMUST00000041674 3423 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Gm26815-201ENSMUST00000181200 3366 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Gm12742-201ENSMUST00000117326 410 ntBASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Gm12241-201ENSMUST00000118330 726 ntBASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Gm11960-201ENSMUST00000122068 925 ntBASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Gm8885-201ENSMUST00000189382 598 ntBASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Gm19087-201ENSMUST00000191430 946 ntBASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Gm7441-201ENSMUST00000220697 1074 ntBASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Gm25857-201ENSMUST00000082788 129 ntBASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Miga2-202ENSMUST00000100214 3586 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Gm45797-201ENSMUST00000212759 1921 ntBASIC10.43□□□□□ -0.74
Rnf220Q6PDX6 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Celf4-202ENSMUST00000115816 3995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Zfp185-201ENSMUST00000114546 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Itsn1-204ENSMUST00000113993 3787 ntTSL 5 BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Slc28a1-201ENSMUST00000026820 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Gm14109-201ENSMUST00000118814 309 ntBASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Gm27501-201ENSMUST00000183599 107 ntBASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Gm6621-201ENSMUST00000193251 772 ntBASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Gm4607-201ENSMUST00000206649 577 ntBASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 AC137950.2-201ENSMUST00000227127 1089 ntBASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms